Pairwise Alignments

Query, 283 a.a., binding protein-dependent transport system, inner membrane component from Phaeobacter inhibens DSM 17395

Subject, 317 a.a., carbohydrate ABC transporter permease from Paraburkholderia sabiae LMG 24235

 Score =  144 bits (363), Expect = 2e-39
 Identities = 78/212 (36%), Positives = 122/212 (57%), Gaps = 1/212 (0%)

Query: 71  TEFLAYFRNSLTVSLGTAFFTTLIAAGAGYAFSRFVFAGKRIIIAVMLITQMFPLLMIIA 130
           ++ L  F NSL +  G+ F    +   A YAFSRF       ++  +L T+M P + +  
Sbjct: 106 SKVLPRFVNSLVIGFGSTFLAVFLGTLAAYAFSRFKVPLADDLLFFILSTRMMPPIAVAI 165

Query: 131 PIYKIVADLGLLNSLTSLIVVYTAFNIPFATFLMQSFFDGIPKDLEEAAMMDGCSRFQAL 190
           PIY +   LGL +S   +IV+YTA N+  A +L++ F D IP++ EEAA++DG +R QA 
Sbjct: 166 PIYLMYRALGLSDSYLGMIVLYTAVNVSLAVWLLKGFIDEIPREYEEAALVDGYTRLQAF 225

Query: 191 RTVVFPLTLPGLGATLGFVFTAAWSELLFALMLISKNDAMTFPVGLLTFVSKFSVDWGQM 250
             VV P  + G+ AT  F    AW+E  FAL+L S  DA T P  +   + +   DW  +
Sbjct: 226 VKVVLPQAITGIAATAIFCLIFAWNEYAFALLLTS-GDAQTMPPFIPFIIGEGGQDWPAV 284

Query: 251 MAAGVLALVPSCLFFIFIQRYLVQGLTSGAVK 282
            AA  L ++P  +F + ++++L++G+T GAV+
Sbjct: 285 AAATTLFVLPILIFTVVLRKHLLRGITFGAVR 316



 Score = 23.1 bits (48), Expect = 0.008
 Identities = 11/35 (31%), Positives = 17/35 (48%)

Query: 22  IAFYLGFALFPLYWLMKIAITPDALIFSEGTRMLP 56
           +A +LG      +   K+ +  D L F   TRM+P
Sbjct: 125 LAVFLGTLAAYAFSRFKVPLADDLLFFILSTRMMP 159