Pairwise Alignments

Query, 470 a.a., nitrogen regulation protein NtrC from Phaeobacter inhibens DSM 17395

Subject, 441 a.a., sigma-54-dependent response regulator transcription factor ZraR from Escherichia coli ECOR38

 Score =  193 bits (491), Expect = 8e-54
 Identities = 155/482 (32%), Positives = 222/482 (46%), Gaps = 78/482 (16%)

Query: 5   VLVADDDRTIRTVLTQALTRAGCKVHATSSLTTLMRWVGEGKGDVVISDVMMPDGNGLEM 64
           +LV DDD +  T+L   L   G  V   +S    +  V E   D+V+ DV M + +G+  
Sbjct: 8   ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVRERVFDLVLCDVRMAEMDGIAT 67

Query: 65  LPKIADDRPGLPVIVISAQNTIMTAIKAAEAEAYDYLPKPFDLPELMKRTAKALTERRSG 124
           L +I    P +PV++++A +++ TA++A +  A DYL KP D   L     KAL    S 
Sbjct: 68  LKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPLDFDNLQATLEKALAHTHS- 126

Query: 125 PGALRAATQAGGPAGGAETAGESHEDLPLVGRTEVMQTLYRLIARVMNTDIPLLITGESG 184
                           AET   S     +VG++  MQ L   IA V  ++  +LI G+SG
Sbjct: 127 --------------IDAETPAVSASQFGMVGKSPAMQHLLSEIALVAPSEATVLIHGDSG 172

Query: 185 TGKSLIARSMHDLSDRRTLPFVRAEAADLASLEGPAQL------------------LAEV 226
           TGK L+AR++H  S R   P V    A L      ++L                    E 
Sbjct: 173 TGKELVARAIHASSARSEKPLVTLNCAALNESLLESELFGHEKGAFTGADKRREGRFVEA 232

Query: 227 RGGTLLLDELADLSEEAQARVVRM-----MDAPGDHQP-----RFIATSQQDLTAAMEAG 276
            GGTL LDE+ D+S   Q R++R      +   G +Q      R IA + +DL A + AG
Sbjct: 233 DGGTLFLDEIGDISPMMQVRLLRAIQEREVQRVGSNQTISVDVRLIAATHRDLAAEVNAG 292

Query: 277 GLRQDLYYRISGTELPVPALRARVDDISLLCAHFLTR-AENEGAPHRRLSEAAREPLRQF 335
             RQDLYYR++   + VP+LR R +DI LL  HFL R AE      +  +  A + L  +
Sbjct: 293 RFRQDLYYRLNVVAIEVPSLRQRREDIPLLTNHFLQRFAERNRKAVKGFTPQAMDLLIHY 352

Query: 336 PWPGNVRQLENVVRRLALTARSEEISLDEVNAALGAQSGGEPMAATGSTLSSEKLSESVA 395
            WPGN+R+LEN V R  +    E IS  E+  A+         A+T   L   +      
Sbjct: 353 DWPGNIRELENAVERAVVLLTGEYISERELPLAI---------ASTPIPLVQSQ------ 397

Query: 396 RHLQRYFDLHGDMLPPPGLYARLMREVETPLIEISLAMTGGNQAKCADLLGINRNTLRKK 455
                      D+ P        + EVE  +I  +L  TGGN+ + A  LGI R TL  K
Sbjct: 398 -----------DIQP--------LVEVEKEVILAALEKTGGNKTEAARQLGITRKTLLAK 438

Query: 456 IT 457
           ++
Sbjct: 439 LS 440