Pairwise Alignments

Query, 353 a.a., Novel Xylose regulator from LacI family (from data) from Phaeobacter inhibens DSM 17395

Subject, 332 a.a., DNA-binding transcriptional regulator IdnR from Escherichia coli ECOR38

 Score = 61.6 bits (148), Expect = 3e-14
 Identities = 65/258 (25%), Positives = 112/258 (43%), Gaps = 27/258 (10%)

Query: 5   TLHDVAAAAGVSYATADRVLNNRGGVAKKSQDRVRAAIADLGYQRDITAANLSRRRRYRF 64
           +L D+A  AGV+  T  R + +   VAK++ +R+   + ++ Y  +     L   + Y  
Sbjct: 7   SLQDIATLAGVTKMTVSRYIRSPKKVAKETGERIAKIMEEINYIPNRAPGMLLNAQSYTL 66

Query: 65  AVLMPAAQEGFFATLHADLEQEVAARSQARQQITLTQVPPFDAAALTCALEACAAEGYDG 124
            +L+P+ Q   FA + A +E   +  +      TL     +D  +   ++    +   DG
Sbjct: 67  GILIPSFQNQLFADILAGIESVTSVHNYQ----TLIANYNYDRDSEEESVINLLSYNIDG 122

Query: 125 VCLVAVQDPSVDAALTGLRAQGVAVVTLVADSAAQARDTYVGIDNRRAG--RTAGDLMRL 182
           + L   +       +  LR+  + VV L+ D   +  D  VG DNR+A        L + 
Sbjct: 123 IIL--SEKYHTIRTVKFLRSATIPVVELM-DVQGERLDMEVGFDNRQAAFDMVCTMLDKR 179

Query: 183 AHRGSAASLGQILPITGSLNARDHADRYAGFCDVVSADLHILPPLETGDDPEILE----- 237
             R       +IL +    + RD   RY G+CD +   LH L PL    +P  +      
Sbjct: 180 VRR-------KILYLGSKDDTRDE-QRYQGYCDAMM--LHNLSPLRM--NPRAISSIHLG 227

Query: 238 -QALRRTLRANPNITGIY 254
            Q +R  L ANP++ G++
Sbjct: 228 MQLMRDALSANPDLDGVF 245