Pairwise Alignments

Query, 378 a.a., secretion protein, HlyD family from Phaeobacter inhibens DSM 17395

Subject, 382 a.a., Probable Co/Zn/Cd efflux system membrane fusion protein from Pseudomonas fluorescens GW456-L13

 Score = 72.8 bits (177), Expect = 2e-17
 Identities = 66/281 (23%), Positives = 113/281 (40%), Gaps = 40/281 (14%)

Query: 97  VPIAPTPVSDATTRIQPAPVAMPTAEITGSGYVLVQDYASVFAKYEGTITDLLVALGDPV 156
           VP     V+ AT   +P    +PT      G +       +  + +GT+ DL    G  V
Sbjct: 37  VPRPAVSVAVATATERPWQARLPTV-----GTLKALQGVDLSLETDGTVIDLQFESGQKV 91

Query: 157 TRGQPLAAVSDPGAQYALKSALIDQSLAQLRLETKRIEVDQSERDYDRLTSLLAKDAVSE 216
             GQPL  +        L++AL D  LAQL              DY R + L+   A+S+
Sbjct: 92  KAGQPLLRLDSAVESALLETALADLGLAQL--------------DYGRGSQLVGSQAISK 137

Query: 217 RVTQDAATALSLAKTALRQAEQDIHLANLKVEIAQEHVDELTIRAPVSGTITQLNARIGN 276
                 +  L  +K  + Q         LK  + ++     +I AP SGTI      +G 
Sbjct: 138 GEFDRLSAVLKKSKATVNQ---------LKAALGKK-----SIIAPFSGTIGIRQVDVG- 182

Query: 277 SVLARVDTIRDTDYLMVITDTASMYLDAEVAETNVSRLRVGLTGEAVLDGFPDQPFEVRV 336
                 D +     +  + D +S+Y+D  V E +V ++ +G   + ++  +P   +   +
Sbjct: 183 ------DYMASGTMIATLQDLSSLYVDFFVPEQSVPKIALGQPVQVIVAAYPTVEYPGTI 236

Query: 337 VGISPVVSAERGTISLRLELDGPPDGIRPNMAARIRITLSD 377
             I+P +      + +R  L  P   + P M A +++ L D
Sbjct: 237 SAINPKIENSTRNVQVRATLANPDGKLMPGMFASLQVLLPD 277