Pairwise Alignments

Query, 378 a.a., secretion protein, HlyD family from Phaeobacter inhibens DSM 17395

Subject, 372 a.a., Macrolide-specific efflux protein MacA from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score = 73.9 bits (180), Expect = 7e-18
 Identities = 60/245 (24%), Positives = 114/245 (46%), Gaps = 10/245 (4%)

Query: 137 VFAKYEGTITDLLVALGDPVTRGQPLAAVSDPGAQYALKSALIDQSLAQLRLETKRI--E 194
           V A+  G +  LLV++GD V + Q L  +    A+  +K   ++ +L +L  E ++   E
Sbjct: 65  VGAQVSGQLKTLLVSIGDNVKKDQLLGVIDPDQAENQIKE--VEATLMELNAERQQAAAE 122

Query: 195 VDQSERDYDRLTSLLAKDAVSERVTQDAATALSLAKTALRQAEQDIHLANLKVEIAQEHV 254
           +  +     R   L    AVS++    AAT +++ +  +   +  I      ++ A+ ++
Sbjct: 123 LKLARVTLARQQQLAKTQAVSQQDLDTAATEMAVKQARIGTIDAQIKRNRASLDTAKTNL 182

Query: 255 DELTIRAPVSGTITQLNARIGNSVLARVDTIRDTDYLMVITDTASMYLDAEVAETNVSRL 314
           +   I AP++G +TQ+    G +V+A     +    ++ + D ++M + A+V+E +V  L
Sbjct: 183 EYTRIVAPMAGEVTQITTLQGQTVIA----AQQAPNILTLADMSTMLVKAQVSEADVIHL 238

Query: 315 RVGLTGEAVLDGFPDQPFEVRVVGISPVVSAERGTI--SLRLELDGPPDGIRPNMAARIR 372
           R G      + G P   +E  +  I P        I    R E+  P   +R +M A++ 
Sbjct: 239 RAGQKAWFTIAGDPQTRYEGVLKDILPTPEKINDAIFYYARFEVPNPKRILRLDMTAQVY 298

Query: 373 ITLSD 377
           I L D
Sbjct: 299 IQLMD 303