Pairwise Alignments

Query, 433 a.a., ABC transporter for D-Sorbitol, periplasmic substrate-binding component (from data) from Phaeobacter inhibens DSM 17395

Subject, 424 a.a., carbohydrate ABC transporter substrate-binding protein, CUT1 family from Pseudomonas syringae pv. syringae B728a ΔmexB

 Score = 71.6 bits (174), Expect = 4e-17
 Identities = 83/333 (24%), Positives = 146/333 (43%), Gaps = 19/333 (5%)

Query: 3   LKSALRAATALTVFASTAAFADT--ITIATVNNGDMIRM-QGLTEDFTAKTGHEVEWVTL 59
           LKS L AA  LT+ A   A ++   +TI+    G  +++ +   + ++ +TG+ V+ V+ 
Sbjct: 4   LKSLLPAAL-LTLSAGFPALSNAADLTISCGAVGAELQLCKEAVDSWSKQTGNNVQVVST 62

Query: 60  EENVLRQRVT---TDISAKGGQFDIMTIGMYETPIWGKNGWLVPLNDLPADYDVDDILPA 116
             N   +R++     +SA+    DI+ I M    +  K+  L  L +L           A
Sbjct: 63  P-NSATERLSFYQQILSAQSTDIDIIQIDMVWPGMLAKH--LTDLRELLPANATQGYFQA 119

Query: 117 MRGGLSHDGTLFAAPFYGESSMIMYRTDLMEKAGLEMPAAPTWDFVADAARQM----TDK 172
                + DG L + P++ +S ++ YR DL++K   + P   TW+ +   A+++     D 
Sbjct: 120 QVDNATVDGRLVSMPWFTDSGLLYYRKDLLDK--YQQPVPQTWEDMTATAQKVQKAERDA 177

Query: 173 DNET-YGICLRGKAGWGENAAFITAMSNSFGARWFDENWAPQFDSEAWSNTLNFYINLLN 231
            N T +G   +G+A  G     +  +S+       +       +S+A    L    + + 
Sbjct: 178 GNATMWGYVFQGRAYEGLTCNALEWISSQPDGGLVNPRGDIVVNSQASRVALTLAKSWVG 237

Query: 232 DAGPPGASNNGFNENLSLFQQGKCGMWIDATVAASFVTNPNDSTVADKVGFALAPDTGL- 290
           D  PPG  N    E   +FQ G      +     + V +  DS + DKVG A  P  G  
Sbjct: 238 DISPPGVLNYTEEEGRGVFQSGNALFMRNWPYVWALVQS-KDSAIKDKVGVAPLPSGGAN 296

Query: 291 GKRSNWLWAWALAIPAGTQKEAAAKEFIQWATS 323
           G  ++ L  W LA+   ++    A E + + TS
Sbjct: 297 GTHASTLGGWGLAVSRYSRNPKLAAELVAYLTS 329