Pairwise Alignments

Query, 433 a.a., ABC transporter for D-Sorbitol, periplasmic substrate-binding component (from data) from Phaeobacter inhibens DSM 17395

Subject, 443 a.a., ABC transporter substrate binding protein (sugar) from Agrobacterium fabrum C58

 Score = 85.9 bits (211), Expect = 2e-21
 Identities = 105/451 (23%), Positives = 183/451 (40%), Gaps = 53/451 (11%)

Query: 2   YLKSALRAATALTVFASTAAFA----------------DTITIATVNNGDMIRMQGLTED 45
           + +++L AA+ +   AS   F                  TI +   N+     ++ +T +
Sbjct: 6   FFRNSLAAASKMVALASCVVFTGSTAGAVDFNWRSQEGQTINVLFTNHPWPNAIKDMTSE 65

Query: 46  FTAKTGHEVEWVTLEENVLRQRVTTDISAKGGQFD-IMTIGMYETPIWGKNGWLVPLNDL 104
           FT KTG +V    L E+ +R R++T + A+    D  +++ + E  ++ K GW   LN L
Sbjct: 66  FTKKTGIKVRVEILNEDPIRARLSTLMQARSSDVDAFISLKIREGAVYNKAGWYADLNPL 125

Query: 105 -------PADYDVDDILPAMRGGLSHDGTLFAAPFYGESSMIMYRTDLMEKAGLEMPAAP 157
                    D++ +D    +R     DG L   P   E  +  +R D+  K    +P   
Sbjct: 126 LKDASLTSPDFNFEDFGEGLRKNEIFDGKLTGVPINVEGPLFYWRKDIFAKC--NVPEPQ 183

Query: 158 TWDFVADAARQMTDKDNETYGICLRG--KAGWGENAAFITAMSNSFGARWFDENWAPQFD 215
             + +  AA+ +++ D        RG   A     A+F+  +   F +    +   P   
Sbjct: 184 YLEDIPAAAKTISECDKSVNAWTARGVRNAIPYPMASFVFNLGGDFKSA---DKTKPGLC 240

Query: 216 SEAWSNTLNFYINLLNDAGPPGASNNGFNENLSLFQQGKCGMWIDATVAASFVTNPNDST 275
            +     L  Y +LL   G  GASN+ F + + L  QGK  M  +++   S +       
Sbjct: 241 QDKTIAGLQMYGDLLKTYGAVGASNHSFPQVVELLGQGKVAMTHESSNEFSNIVK-FPGR 299

Query: 276 VADKVGFALAPDTGLGKRSNWLWAWALAIPAGTQKEAAAKEFIQWATSKDYIELVAENEG 335
             D     L P    G      + W L++   ++++ A   F+QWATS + IE      G
Sbjct: 300 AEDLAIKVLPPGKESGISKPVAFGWGLSMSNFSKRKEATWLFMQWATSPE-IEARLIQAG 358

Query: 336 WANVPPGARISLYENANYK----DIPFAKMTLESI--LSADPNNPTVDPVPYVGIQFAAI 389
            A  PP  R S+++ A+ K    ++P  K   ++I  +S         P          +
Sbjct: 359 VA--PP--RSSVFDGADMKKFTDELPIRKSWADAIRQISKTGTGDYASPTD-------KV 407

Query: 390 PEFAGIATQVGQEFSAALAGQQTAEEALAKA 420
           P+   I  +V Q++   L G  T +E   +A
Sbjct: 408 PQTREIIGKVVQDY---LLGANTIKEGACEA 435