Pairwise Alignments

Query, 288 a.a., ABC transporter for D-Sorbitol, permease component 2 (from data) from Phaeobacter inhibens DSM 17395

Subject, 286 a.a., Inner membrane ABC transporter permease protein YcjO from Xanthobacter sp. DMC5

 Score =  138 bits (348), Expect = 1e-37
 Identities = 87/274 (31%), Positives = 141/274 (51%), Gaps = 8/274 (2%)

Query: 12  IMMAPAVILLLGWMLVPLTMTLYFSFKKYLPLRGGDLGWVGFDNYARFLSSSAFWPSVQA 71
           + +  AV  LL  ++ P+   +  SF +     G    W G DNY R LS   FW ++  
Sbjct: 11  LFLGLAVTALL--IVAPVVYAVSLSFYQMDSFVGAPK-WAGLDNYTRMLSQWVFWRALIN 67

Query: 72  TLVIVGGVLAITVILGVFLALLLNQPMWGQGIVRILVIAPFFVMPTVSALVWKNMFMDPV 131
             +   G +   V+LG+  AL+LNQ   G+ IVR L I P+ ++PTV  ++     +D  
Sbjct: 68  GFIYSFGTIIFQVVLGIGFALVLNQVFPGRNIVRGLSILPY-LLPTVVVVLTFKWMVDGS 126

Query: 132 NGLFAHLWKAFGAEPVSWLSE--ASLQSIILIVSWQWLPFATLILLTAIQSLDSEQLEAA 189
            G+   +  A G   V W     A++ S+IL+  W W PF T   L A+Q++ S   EAA
Sbjct: 127 IGVLTTMMSALGLPQVQWFESPGAAMASVILVSVWMWTPFVTTTFLAALQTVPSSLYEAA 186

Query: 190 EMDGAPPVARFGYITLPHLSRAITVVVLIQTIFLLSIFAEIFVTTQGS--FGTKTLTYLI 247
           ++DG   V RF +ITLP L   +TV+VL++ +++ + F  I++ TQG     T+ L  L 
Sbjct: 187 KVDGTNAVQRFFHITLPMLKPILTVIVLLRAVWMFNKFDVIWLLTQGGPVGATEHLAILS 246

Query: 248 YQRVLESQNVGLGSAGGVYAIILANIVAIFLMRI 281
           Y++     ++G G+A    +  + ++V     R+
Sbjct: 247 YKQAFGQFDIGGGAAVATISFAILSLVVFIYFRL 280