Pairwise Alignments

Query, 276 a.a., ABC transporter for D-Sorbitol, permease component 1 (from data) from Phaeobacter inhibens DSM 17395

Subject, 280 a.a., carbohydrate ABC transporter membrane protein 2, CUT1 family from Pseudomonas syringae pv. syringae B728a ΔmexB

 Score =  129 bits (324), Expect = 7e-35
 Identities = 81/268 (30%), Positives = 138/268 (51%), Gaps = 13/268 (4%)

Query: 16  LAWAVGLLIFFPILWTILTSFKTEAQAISDPPVFLFFDWTLE----NYSVVQERSDYMRF 71
           L   V L   FP  + +LTS K  +       +F    W  E    NY+ V  ++ +++ 
Sbjct: 18  LVGVVLLYAIFPFYYAVLTSLKPSSA------LFEVSYWITEADFSNYAAVLSQASFLQA 71

Query: 72  LWNSVIIAGGSTILGIIIAVPAAWSMAFVPSKRTKDILLWMLSTKMLPAVGVLYPIYILF 131
           + NS+++A    +L + + + A++++  V  +    +L+ +L   M P V VL  ++ + 
Sbjct: 72  IANSLVVALSVVMLALFLGLTASYALGRVKFRGRGTVLMMVLGVSMFPQVAVLSGLFEVI 131

Query: 132 IKMGLLDNRFGLVVVLMLINLPIIVWMLYTYFKEIPGEILEAARMDGATLKEEILYVLTP 191
             +GL +  + L++   +  LP  VW+L T+  ++P E+ EAA MDGA+    +  VL P
Sbjct: 132 RALGLYNTSWALILSYTIFTLPFTVWVLTTFMGQLPHELEEAAIMDGASPWVTLTRVLLP 191

Query: 192 MAIPGIASTLLLNIILAWNEAFWTLNLT---AAKAAPLTAFIASYSSPEGLFYAKLSAAS 248
           +  P + +T LL  I AWNE  + L  T   A +  P+   + S  S   L +  L AAS
Sbjct: 192 LLWPALVTTGLLAFIAAWNEFLFALTFTLTDAQRTVPVAIALISGGSSHELPWGLLMAAS 251

Query: 249 TMAIAPILILGWFSQKQLVSGLTFGAVK 276
            +   P++IL    Q+++VSGLT GA+K
Sbjct: 252 VLVTVPLVILVLIFQRRIVSGLTAGALK 279