Pairwise Alignments

Query, 236 a.a., transcriptional regulator, GntR family from Phaeobacter inhibens DSM 17395

Subject, 243 a.a., HTH-type transcriptional repressor NagR from Pseudomonas sp. RS175

 Score = 75.1 bits (183), Expect = 1e-18
 Identities = 69/218 (31%), Positives = 105/218 (48%), Gaps = 10/218 (4%)

Query: 12  PLYLQISEALTREIAAGRLADGERLAPERRLAQTYGTTVRTLRKALSELEKQGMLERIQG 71
           PLYLQ++  L   I AG+    + +  ER L++  G +  T RKAL  L +QG++ R QG
Sbjct: 16  PLYLQLARNLETAIHAGQWKAEQAMPSERSLSEQLGISRVTARKALEVLFEQGLIRRNQG 75

Query: 72  SGNYIRTTQTLP-SVYSMFRLELPNGGGLPTADVLSVTECDKPA--DLPQFGTSA--QAT 126
           SG +I      P S  S F   L   G +P +  L   E   P   +L + G S   +  
Sbjct: 76  SGTFITPRLEQPLSRLSGFSEMLRLKGFVPGSQWLE-REITPPTHEELIRLGLSPTDKVA 134

Query: 127 RIRRLRYLDSTIIAVEEIWLDAGAGRVDVTQ-LSDSLYRYYRLQLGFWISRAEDRVSLAP 185
           R++RLR  D T++A+E   L A    +   Q + DSLY +    +G  + RA   +    
Sbjct: 135 RLKRLRKADDTVMAIEMSTLPASI--IPKPQAVGDSLYEFLD-GIGKPVVRALQHIQAIN 191

Query: 186 VPDWAPALFTKPPGTTVGYIERLSWAQDLAPVEFSRTW 223
             D   AL    PGT +  + R+ + +D  P+E + T+
Sbjct: 192 ASDEFAALVGIAPGTAMLLMTRVGYLEDNTPIEVTDTY 229