Pairwise Alignments

Query, 236 a.a., transcriptional regulator, GntR family from Phaeobacter inhibens DSM 17395

Subject, 248 a.a., HTH-type transcriptional repressor NagR from Escherichia fergusonii Becca

 Score = 67.4 bits (163), Expect = 2e-16
 Identities = 64/226 (28%), Positives = 104/226 (46%), Gaps = 32/226 (14%)

Query: 12  PLYLQISEALTREIAAGRLADGERLAPERRLAQTYGTTVRTLRKALSELEKQGMLERIQG 71
           PLY++ +E +   + +G L  G  L  ER L+Q  G +  T+RKA+  LE++G++ R +G
Sbjct: 23  PLYIKFAETVKNAVRSGVLEHGNILPGERDLSQLTGVSRITVRKAMQALEEEGVVTRSRG 82

Query: 72  SGNYIRTTQTLPSVYSMFRLELPNGGGLPTADVL------------SVTEC-DKPADLPQ 118
            G  I          ++F   L    G     VL             V +C ++ A    
Sbjct: 83  YGTQIN---------NIFEYSLKEARGFSQQVVLRGKKPDTLWVNKRVVKCPEEVAQQLA 133

Query: 119 FGTSAQATRIRRLRYLDSTIIAVEEIWLDAGAGRVDVTQLSDSLYRYYRLQLGFWISRAE 178
               +    ++R+RY+D   +++EE W+ A     DV  +  SLY Y+R Q   +  R  
Sbjct: 134 VEAGSDVFLLKRIRYVDEEAVSIEESWVPAHLIH-DVDAIGISLYDYFRSQ-HIYPQRTR 191

Query: 179 DRVSLAPVPDWA----PALFTKPPGTTVGYIERLSWAQDLAPVEFS 220
            RVS A +PD        L +K P   V  I++++  Q   P+E+S
Sbjct: 192 SRVS-ARMPDAEFQSHIQLDSKIP---VLVIKQVALDQQQRPIEYS 233