Pairwise Alignments

Query, 422 a.a., ATP-dependent Clp protease ATP-binding subunit ClpX from Phaeobacter inhibens DSM 17395

Subject, 435 a.a., ATP-dependent protease ATPase subunit HslU from Xanthobacter sp. DMC5

 Score = 92.8 bits (229), Expect = 2e-23
 Identities = 91/274 (33%), Positives = 119/274 (43%), Gaps = 64/274 (23%)

Query: 148 LTEAGYVGEDVENIILKLLQASEYNVERAQRGIVYIDEVDKITRKSENPSITRDVSGEGV 207
           LTE      D E I  + + A E N      GIV++DE+DKI  +        DVS EGV
Sbjct: 218 LTEEADKLIDQEAITQEAIHAVENN------GIVFLDEIDKIAGREGRSGA--DVSREGV 269

Query: 208 QQALLKLMEGTVASVPPQGGRKHPQQEFLQVDTTNILFICGGAFAGLDKIIKQRGKGSAM 267
           Q+ LL L+EGT  S       KH       V T +ILFI  GAF                
Sbjct: 270 QRDLLPLIEGTTVST------KHGS-----VKTDHILFIASGAF---------------- 302

Query: 268 GFGADVRDDSDAGVGETFKDLEPEDLLKFGLIPEFVGRLPVLATLEDLDEDALITILTKP 327
                                +P DLL     PE  GRLP+   LE L     + ILT+ 
Sbjct: 303 ------------------HVSKPSDLL-----PELQGRLPIRVELEALTRADFVRILTET 339

Query: 328 KNALVKQYQRLFELEDTELDFTEEALSSIAKKAIE-----RKTGARGLRSILEDILLNTM 382
           + +LVKQ   L   E   LD T +A+ +IA  A+E        GAR L++++E +L +  
Sbjct: 340 EASLVKQSVALMGTEGVTLDVTADAVEAIADAAVEVNSNVENIGARRLQTVIERVLDDLS 399

Query: 383 FELPGMDSVEKVVVNEEAVNSDAQPLMIHADAEK 416
           F  P   S E VVV+ E V S    L  +AD  +
Sbjct: 400 FSAPDR-SGETVVVDAEYVRSRVADLAKNADLSR 432



 Score = 89.4 bits (220), Expect = 2e-22
 Identities = 44/103 (42%), Positives = 66/103 (64%), Gaps = 2/103 (1%)

Query: 65  TPKDICEVLDDYVIGQAMAKRVLSVAVHNHYKRLNHAQKAGSDIELSKSNILLIGPTGCG 124
           +P++I   LD +++GQ  AKR +++A+ N ++R    +K     E+   NIL+IGPTG G
Sbjct: 5   SPREIVSELDRHIVGQGKAKRAVAIALRNRWRRQQLDEKLRE--EVLPKNILMIGPTGVG 62

Query: 125 KTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 167
           KT +++ LAR+   PF   +AT  TE GYVG DVE I+  LL+
Sbjct: 63  KTEISRRLARLAGAPFLKVEATKFTEVGYVGRDVEQIVRDLLE 105



 Score = 26.2 bits (56), Expect = 0.002
 Identities = 20/85 (23%), Positives = 38/85 (44%), Gaps = 10/85 (11%)

Query: 325 TKPKNALVKQYQRLFELEDTELDFTEEALSSIAKKAIERKTGARGLRSILEDILLNTMFE 384
           +KP+   VK+   L   E+ +    +EA++  A  A+E      G+      + L+ + +
Sbjct: 203 SKPRRVTVKEAHPLLLTEEADKLIDQEAITQEAIHAVEN----NGI------VFLDEIDK 252

Query: 385 LPGMDSVEKVVVNEEAVNSDAQPLM 409
           + G +      V+ E V  D  PL+
Sbjct: 253 IAGREGRSGADVSREGVQRDLLPLI 277