Pairwise Alignments

Query, 422 a.a., ATP-dependent Clp protease ATP-binding subunit ClpX from Phaeobacter inhibens DSM 17395

Subject, 445 a.a., ATP-dependent protease ATP-binding subunit HslU from Pseudomonas simiae WCS417

 Score = 92.0 bits (227), Expect = 3e-23
 Identities = 55/148 (37%), Positives = 89/148 (60%), Gaps = 16/148 (10%)

Query: 65  TPKDICEVLDDYVIGQAMAKRVLSVAVHNHYKRLNHAQKAGSDIELSKSNILLIGPTGCG 124
           TP++I   L+ ++IGQ  AKR +++A+ N ++R+   ++    +E++  NIL+IGPTG G
Sbjct: 4   TPREIVHELNRHIIGQDDAKRAVAIALRNRWRRMQLPEELR--VEVTPKNILMIGPTGVG 61

Query: 125 KTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQASEYNVERAQRGIVYID 184
           KT +A+ LA++ + PF   +AT  TE GYVG DVE+II  L  A+   + R Q       
Sbjct: 62  KTEIARRLAKLANAPFIKVEATKFTEVGYVGRDVESIIRDLADAA-LKLLREQ------- 113

Query: 185 EVDKITRKSENPSITRDVSGEGVQQALL 212
           E+ K++ ++E      D + E +  ALL
Sbjct: 114 EMTKVSHRAE------DAAEERILDALL 135



 Score = 83.6 bits (205), Expect = 1e-20
 Identities = 81/275 (29%), Positives = 123/275 (44%), Gaps = 67/275 (24%)

Query: 150 EAGYVGEDVENIILKLLQASEYNVERAQRGIVYIDEVDKITRKSENPSITRDVSGEGVQQ 209
           EAG +  + E +  K L+A E      Q GIV+IDE+DK+ ++  +  +  DVS EGVQ+
Sbjct: 227 EAGRLVNE-EELKAKALEAVE------QHGIVFIDEIDKVAKRGNSGGV--DVSREGVQR 277

Query: 210 ALLKLMEGTVASVPPQGGRKHPQQEFLQVDTTNILFICGGAFAGLDKIIKQRGKGSAMGF 269
            LL L+EG   +            +   V T +ILFI  GAF  L K             
Sbjct: 278 DLLPLIEGCTVNT-----------KLGMVKTDHILFIASGAFH-LSK------------- 312

Query: 270 GADVRDDSDAGVGETFKDLEPEDLLKFGLIPEFVGRLPVLATLEDLDEDALITILTKPKN 329
                               P DL     +PE  GRLP+   L+ L       IL++P  
Sbjct: 313 --------------------PSDL-----VPELQGRLPIRVELKALTPGDFERILSEPHA 347

Query: 330 ALVKQYQRLFELEDTELDFTEEALSSIAKKA--IERKT---GARGLRSILEDILLNTMF- 383
           +L +QY+ L + E   ++F  + +  +A+ A  +  KT   GAR L ++LE +L    F 
Sbjct: 348 SLTEQYRELLKTEGLGIEFQADGIKRLAEIAWQVNEKTENIGARRLHTLLERLLEEVSFS 407

Query: 384 --ELPGMDSVEKVVVNEEAVNSDAQPLMIHADAEK 416
             +L G  + E + ++ E VNS    L  + D  +
Sbjct: 408 AGDLAGAQNGEVIKIDAEYVNSHLGELAQNEDLSR 442