Pairwise Alignments

Query, 422 a.a., ATP-dependent Clp protease ATP-binding subunit ClpX from Phaeobacter inhibens DSM 17395

Subject, 443 a.a., HslU--HslV peptidase ATPase subunit from Dickeya dianthicola ME23

 Score = 90.9 bits (224), Expect = 7e-23
 Identities = 44/101 (43%), Positives = 68/101 (67%), Gaps = 2/101 (1%)

Query: 65  TPKDICEVLDDYVIGQAMAKRVLSVAVHNHYKRLNHAQKAGSDIELSKSNILLIGPTGCG 124
           TP++I   LD Y+IGQ  AKR +++A+ N ++R+   +      E++  NIL+IGPTG G
Sbjct: 5   TPREIVSELDSYIIGQHKAKRAVAIALRNRWRRMQLEENLRH--EVTPKNILMIGPTGVG 62

Query: 125 KTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKL 165
           KT +A+ LA++ + PF   +AT  TE GYVG++V++II  L
Sbjct: 63  KTEIARRLAKLANAPFIKVEATKFTEVGYVGKEVDSIIRDL 103



 Score = 85.9 bits (211), Expect = 2e-21
 Identities = 75/245 (30%), Positives = 107/245 (43%), Gaps = 58/245 (23%)

Query: 177 QRGIVYIDEVDKITRKSENPSITRDVSGEGVQQALLKLMEGTVASVPPQGGRKHPQQEFL 236
           Q GIV+IDE+DKI ++ +      DVS EGVQ+ LL L+EG   S       KH      
Sbjct: 249 QHGIVFIDEIDKICKRGDTSG--PDVSREGVQRDLLPLVEGCTVST------KHGM---- 296

Query: 237 QVDTTNILFICGGAFAGLDKIIKQRGKGSAMGFGADVRDDSDAGVGETFKDLEPEDLLKF 296
            V T +ILFI  GAF                     V   SD                  
Sbjct: 297 -VKTDHILFIASGAF--------------------QVASPSD------------------ 317

Query: 297 GLIPEFVGRLPVLATLEDLDEDALITILTKPKNALVKQYQRLFELEDTELDFTEEALSSI 356
            LIPE  GRLP+   L+ L  +    ILT+P  +L +QYQ L E E   + F  + +  I
Sbjct: 318 -LIPELQGRLPIRVELQALTTEDFERILTEPSASLTRQYQALLETEGVSITFQPDGIRRI 376

Query: 357 AKKA--IERKT---GARGLRSILEDILLNTMFELPGMDSVEKVVVNEEAVNSDAQPLMIH 411
           A+ A  +  +T   GAR L ++LE ++    +    M+  + V ++ + V S    L+  
Sbjct: 377 AEAAWQVNERTENIGARRLHTVLERLIEEVSYGASEMNG-QTVTIDADYVRSHLDELVAD 435

Query: 412 ADAEK 416
            D  +
Sbjct: 436 EDLSR 440