Pairwise Alignments

Query, 990 a.a., SusC/RagA family protein from Pedobacter sp. GW460-11-11-14-LB5

Subject, 1116 a.a., TonB-linked outer membrane protein, SusC/RagA family from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  397 bits (1019), Expect = e-114
 Identities = 311/1051 (29%), Positives = 497/1051 (47%), Gaps = 119/1051 (11%)

Query: 15   LVFSALMVKAQTG------SVSGKVLDETGLPLPGASVVVKGTTRSTSTDANGNYKLGGL 68
            LV + +++K + G       ++G VL E G PLPGA+V VKG++R T TD +G +   GL
Sbjct: 110  LVDTYIVIKPKAGIPAAIIEITGTVLGEDGEPLPGATVRVKGSSRGTVTDLDGTFAFSGL 169

Query: 69   SDGSITLSASFVGYQTLDKAVSISANATVNFQLVPDAQKLNEVVVIGYGTAEKKNLTGSI 128
             + ++ L  SF+GY   +  + +++ + +   L P    L+E+VVIGYG  ++K +T +I
Sbjct: 170  EEDAV-LVVSFIGYDPQE--IPVNSRSKIEVILKPSQNDLSEIVVIGYGQQDRKEVTSAI 226

Query: 129  TTVSAKDFQKGAITTPEQLIQGKVAGVNIISNSGQPGVGSQIRIRGGASLNASNDPLVVI 188
            +     +     +  P+QL+QG++ GV++ + +G PG   ++ IRG  SL+  N+PL V+
Sbjct: 227  SNFRPDEKNFRQVLGPDQLMQGRMPGVHVGAGAGTPGSNVRVSIRGIGSLSGQNEPLYVV 286

Query: 189  DGVPFSGN-----TIDNAPSPLSLINPNDIETFTVLKDANATAIYGSRASNGVILITTKK 243
            DG+P   +      +    +PLS +NPNDIE+  VLKDA + AIYGSRA+NGV++ITTK 
Sbjct: 287  DGIPLVNHNAALFNLGEGMNPLSELNPNDIESIEVLKDAASAAIYGSRATNGVVIITTKS 346

Query: 244  GGSGAPVINFSTNNSIATVARKVDVLSAD----------------QVRAYVNANGNAT-- 285
            G +G   +N  TN  I  +     +  AD                Q   Y   +GN    
Sbjct: 347  GKAGQSSLNIETNFGIQYLPNLDKLKMADSDLYLEVLNEARYNYNQQNGYSPGDGNFVDY 406

Query: 286  -QKALLGTANTDWQDAIYQRAFTSDNNLSIAGSFKGVPYRVSAGYLDQDGLLITDKLKRG 344
             +    G  +T+W D + + A  S+ N+S +         +S GYL+Q+G++ T+  K+ 
Sbjct: 407  MEDPYPGLPDTNWLDLVLRDALVSNVNVSFSTGTDKTKLYISGGYLNQEGVIKTNDYKKY 466

Query: 345  TGSITLSPRLFKDHLKIDLNLKGSLTDSHFANAGAINSAIQFDPTQPIYADNKYGNYFEW 404
               I ++ +   + L+I  N   S + +H    G   S+I          D  Y    ++
Sbjct: 467  NAKINVTHQAV-NWLEIGTNTNLSFSRNHRIPNGTYGSSIFLRSMGQRPFDRPYKPNGDY 525

Query: 405  TQGTGSAMVPNPNAPRNPVALIRLQDNNGNAARSVGNAKFDYSFHFLPELHANLNLGYDV 464
              G    +V +     N + ++  Q+   +  R +GN   D  F   P  H   + G D 
Sbjct: 526  YVGGTEELVYH-----NNLQILNEQNTKLDNYRMLGNVYADIKFS--PSFHLKNSFGMDA 578

Query: 465  --SKGYGSIAVPTYAAQSAATSGSFSRALKTEADKFSEFYLNYAHTVESIKSRFDVTAGY 522
              ++ Y      T      A  G      +   +   E  L + HT    K   +   G+
Sbjct: 579  IYTEDY---LYYTDEHPYGAGQGRLLDERRMMTNGLIENTLYFDHTFG--KLSVNALVGH 633

Query: 523  GYYDIATTGYNFTNY-TGLGVPIVTPVFPF------------SVERNKMLSYYGRFNYTL 569
             Y  + T+    TNY  G G P  +P F                  N + SYY R N + 
Sbjct: 634  SYQKVTTS----TNYIDGRGFP--SPSFDVLSVASEIANASSGFGENALESYYSRANLSW 687

Query: 570  ADKYILSATMRADASSKFAESNRWGYFPSVGFTWRIIGENFLKDSKVLSDLKLRLSYGET 629
             DKY+LS ++RAD SSKF+   R+G FPS+   W +  ENF K S+  +DLKLR SYG T
Sbjct: 688  EDKYLLSLSIRADGSSKFSPEKRYGSFPSISAGWNLSDENFWKFSQ--TDLKLRASYGAT 745

Query: 630  GNKDGADIGNYNYIAKYYASSN-TGQYQIG-NTFYNYYAPAGYDPDLRWETTTTYNAGLD 687
            GN+DG  IG+Y Y A     +N  G   +  +TF N        P+L WET   ++ G+D
Sbjct: 746  GNQDG--IGSYAYQALMSGGANYAGNSGLSISTFGN--------PNLTWETANQFDVGID 795

Query: 688  YGFLGGRLYGSIDVYYKKTADLLSKITIPVGTNFSNELVTNVGNMDVKGAEVSLNFTAVK 747
             G   G+   S D + K T +LL  + I   + FS+ + +N+G+M   G E  L++   +
Sbjct: 796  LGLWSGKANFSADYFIKNTENLLYNMPIHATSGFSS-VTSNIGSMRNTGLEFLLDYNH-R 853

Query: 748  TENTTWDFGVNASYNKRKVTNLTLNPNSGFKIDAG---DISGGTGIHLKYNAVNQIPQSY 804
                 W    N S+ + ++T+L    +    I A     +    G    Y  +       
Sbjct: 854  FGELQWQSSFNISFIQNELTSLL--GDDPLLIGANRTLQVGEEVGSFYMYKMLGIFQTDE 911

Query: 805  FVYKQVYDAGGKPLEGVYQDLNGDGTITTDDQYFYKSPDPQFTFGFNTSFTYKKWSVNTV 864
             V + +Y+ G +  +  Y+D+NGDG I  DD+    + +P F  G++ +F YK + ++  
Sbjct: 912  EVPEPLYEQGVRAGDVHYEDVNGDGIINVDDRQIIGTSNPDFYGGWSNTFQYKNFDLSAF 971

Query: 865  LRASLGNYVYDNVSSNFGIKSNLLSS----------------VGILNNASSDILNTGFTN 908
            L  S G+ +Y    +N+ I +  L S                 G  N     I  TG+  
Sbjct: 972  LTFSQGSEIY----ANWRITTERLGSGRQGFREEPALERWTGPGTSNEVPRAIHGTGYNT 1027

Query: 909  TQYLSDYYIKNASFLKMDNLGLAYNIGK--LSKDGTATMRISANCQNVFVVTKYKGLDPE 966
              Y S  ++++ASFL++  L L Y++ +  L K   + +RI    +N+++ + Y GLDPE
Sbjct: 1028 --YNSSRFLEDASFLRLRTLSLGYSLPQSLLEKLQMSKLRIFVQGENLYLFSNYTGLDPE 1085

Query: 967  LATGIDYNL-------YPRPRTYTLGLNVGF 990
            ++   D           P+PRT  LGLN  F
Sbjct: 1086 VSKNYDARYMSDDNMNLPQPRTIRLGLNASF 1116