Pairwise Alignments

Query, 182 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

Subject, 191 a.a., RNA polymerase sigma-70 factor, Bacteroides expansion family 1 from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 78.2 bits (191), Expect = 8e-20
 Identities = 54/163 (33%), Positives = 83/163 (50%), Gaps = 13/163 (7%)

Query: 11  GDQIAFEIVFKLSHKKVYAYFNKKTASKELADELTQLAFIKMWRFRHTLTPDFTLDTQLF 70
           GD  AF  V+ L  KK+Y +  K+  + ELA+++ Q  F + W  R +L    ++++ L 
Sbjct: 15  GDSEAFNAVYALYWKKLYFHAYKRVGTAELAEDMVQDVFFQFWLKRASLVITKSIESYLM 74

Query: 71  RIAKTTLLDHFK-KLATEERKLKSFYQDNIAELYAPSSDYETN-------QQLEAVLNQL 122
            + K  +L HF+ K A  E+     Y + +  L    SD E           ++ ++ +L
Sbjct: 75  GMLKNKILMHFREKYAASEK-----YDELVRHLSVHDSDTERRIDYGDLLSHVDELIERL 129

Query: 123 PPTRKKVFILSRIEGYSYNEIAEQLSISPRTVEKHISLALKQL 165
           P   K VF LSR E  S  EIA++L IS +TVE HI  +L  L
Sbjct: 130 PEQSKHVFRLSRKEFLSNMEIADRLQISVKTVEYHIHYSLTYL 172