Pairwise Alignments

Query, 182 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

Subject, 193 a.a., RNA polymerase sigma-70 factor from Phocaeicola dorei CL03T12C01

 Score = 83.2 bits (204), Expect = 3e-21
 Identities = 54/170 (31%), Positives = 95/170 (55%), Gaps = 15/170 (8%)

Query: 5   IQHIIEGDQIAFEIVFKLSHKKVYAYFNKKTASKELADELTQLAFIKMWRFRHTLTPDFT 64
           I  + +G   AF+ ++++  K++YAY  + T S E ++E+ Q  F+K+W  R  +  D T
Sbjct: 13  IHDLKQGSHKAFDKIYQMYSKRLYAYSLQFTKSSEESEEIVQEVFVKLWSNRINIRQDET 72

Query: 65  LDTQLFRIAKTTLLDHFKKLATEERKLKSFYQDNIAELYAPSSDYETNQQLE-------- 116
           L + LF +AK  L++ +++           Y++ I  +   S++ +T+ +LE        
Sbjct: 73  LRSLLFIMAKHRLINAYRQKINH-----PIYEEYIYHIDTLSTE-DTHYKLEYNEFLFRF 126

Query: 117 -AVLNQLPPTRKKVFILSRIEGYSYNEIAEQLSISPRTVEKHISLALKQL 165
              + +LP T++KV  LSR +  S  EIAE+LS+S +TV+  +SL LK L
Sbjct: 127 LKTIEKLPDTQQKVIRLSRFKQLSNKEIAEKLSLSEQTVKNQLSLGLKTL 176