Pairwise Alignments

Query, 300 a.a., permease from Pedobacter sp. GW460-11-11-14-LB5

Subject, 296 a.a., predicted chloramphenical resistance permease (NCBI) from Escherichia coli BW25113

 Score = 86.3 bits (212), Expect = 8e-22
 Identities = 76/288 (26%), Positives = 137/288 (47%), Gaps = 19/288 (6%)

Query: 10  IAGIVPYIIWGTMSVPLRNIKGFPPHEILYYRIFISIIVVWATILLFRRKALQNDLNLLK 69
           +  +  Y IWG      + I   P  EIL +R      V+W+   +    ++    + LK
Sbjct: 11  LLALAAYFIWGIAPAYFKLIYYVPADEILTHR------VIWSFFFMVVLMSICRQWSYLK 64

Query: 70  SL-NTRQKTRLLLLTIVSSFLITGNWFTYIYAVNSVSLKAAAFAYMVCPLLTALCGFIIL 128
           +L  T QK   + +  VS+ LI GNW  +I+AVN+  +  A+  Y + PL+  + G I L
Sbjct: 65  TLIQTPQK---IFMLAVSAVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFL 121

Query: 129 KEQLTKAKIIALIIAFISII--LLATGSLHEVMWAIIIASFYALYVIVLKVIKDVDKFNF 186
            E+  + + +A+I+A   ++  L   GSL  +  A+ +A  +A Y +V K I    +   
Sbjct: 122 GERFRRMQWLAVILAICGVLVQLWTFGSLPII--ALGLAFSFAFYGLVRKKIAVEAQTGM 179

Query: 187 LGVQLILSGLMMLPLYFL--NAAPFPTETFFWAHIFLIAI-VFTIIPLFLNSYALLGMPS 243
           L   + L  +  + L+ +  ++     +     ++ LIA  + T +PL   + A   +  
Sbjct: 180 LIETMWLLPVAAIYLFAIADSSTSHMGQNPMSLNLLLIAAGIVTTVPLLCFTAAATRLRL 239

Query: 244 SALGILIYLNPIVAFTVAFFYFKEK--IDLHQLFAYLLLLLSIVIFNA 289
           S LG   Y+ P + F +A  ++ EK   D    FA++ + L+I + +A
Sbjct: 240 STLGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFAFIWVALAIFVMDA 287