Pairwise Alignments

Query, 606 a.a., two-component sensor histidine kinase from Pedobacter sp. GW460-11-11-14-LB5

Subject, 512 a.a., HAMP domain-containing histidine kinase from Phocaeicola dorei CL03T12C01

 Score =  173 bits (438), Expect = 2e-47
 Identities = 120/407 (29%), Positives = 212/407 (52%), Gaps = 20/407 (4%)

Query: 212 LEKKFKREDEIERKKLELKIAALGKDTFSYTRSSVVEDVSKELQE---TNVPIYKRINFS 268
           + K  + E   ++K+  L+I      T    ++  +E ++K  Q    + + ++  IN  
Sbjct: 112 ITKVIETEPFKQQKRFGLEINEPVSTTID--KNGTLELLTKYFQRGIHSQLDLFTEINLH 169

Query: 269 SLGRLLKQELLANNISLEPAYRISLA--RKDSTIFMAAANVKGEFLPENTYKTPLFGNDI 326
           +   L  + L    I   P +RI +   R+DSTI    ++ + ++ P     +  +  D+
Sbjct: 170 TFDSLFTRTLAMRGIIYLP-HRIEIVNLRQDSTIVQGLSSPQ-KYRPGKEAVSYYYNYDL 227

Query: 327 FRDPGMLLVSFPDKNSAIISNLSATLASSIGLLLVLVFIFSYTLYAILKQKKLSEMKTDF 386
           +      L   P  N+ ++  +   L +S  ++++L   F + +  IL+QK + EMK DF
Sbjct: 228 YNKMAYRLWVEPT-NTIVLQQMKGILYTSFFIIIILGLSFWFLIRIILRQKSVEEMKEDF 286

Query: 387 INNMTHEFKTPVATIMIASEALKDPEVTEDKARLKRLAGIIYDENVRLGSHIERVLSIAR 446
            +N+THE KTP+A    A++AL +    E+  + +    II  +  +L   +E++LS++ 
Sbjct: 287 THNITHELKTPIAVAYAANDALLNFNGAENLTKRQNYLQIIQAQLKQLSGLVEQILSMSM 346

Query: 447 LEKGELKMENAEVDVNDLIVIVLDSMELQLQKRNAIINVHTDAEHAVIYGDELHLSNVIY 506
            ++   ++    V++  ++  ++    L+  K      +    E  ++  D LHL NVI 
Sbjct: 347 EQRKNFRLNYEPVELRPMLENLISQHRLKADKPTEFKLIMK--EDMILRADRLHLYNVIS 404

Query: 507 NLIDNANKYSSGTPEITIT-TRNTGK-------NLIIEIADKGIGMTKEHAKRIFDQFYR 558
           NLIDNA KYS     I I+ TR  G        ++ ++I DKGIG+  +  K +F++FYR
Sbjct: 405 NLIDNAIKYSDEKAYICISATRCNGSCNSSCNAHVTLKIQDKGIGIPTDKQKHLFNKFYR 464

Query: 559 VPTGNLHDVKGFGLGLNYVQDIIKKLNGTVKVSSEKDRGTTFEISLP 605
           VPTGNLH+VKG+GLGL YV+ +I++  GTV V S   +G+TF + +P
Sbjct: 465 VPTGNLHNVKGYGLGLYYVKTMIEQHKGTVSVESITGKGSTFTLQIP 511



 Score = 26.6 bits (57), Expect = 0.003
 Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 1/56 (1%)

Query: 3  KKSFWLITVLMTVALLGVFVMQLYYIRESYKLKSQLFDEQVNQTL-TSVVNKIQRR 57
          K  F  I  L+ ++L+GVF  Q Y++   Y    +  D  + +TL  S  N++  R
Sbjct: 30 KIPFKAIAALIILSLIGVFAYQAYWLTGLYTSMKKDMDNCLIETLQVSDYNEMMER 85