Pairwise Alignments

Query, 183 a.a., RNA polymerase sigma factor from Pedobacter sp. GW460-11-11-14-LB5

Subject, 176 a.a., alternative sigma factor from Pseudomonas putida KT2440

 Score = 52.0 bits (123), Expect = 6e-12
 Identities = 36/121 (29%), Positives = 60/121 (49%), Gaps = 10/121 (8%)

Query: 34  AEDILQDVWFQLSNQPE-AGAIEQISGWLYRVARNKITDKYRKQKEESLEDFTFEGEDGE 92
           AED++QD +F+LS  P+   + +    +L+++ RN   D YRKQ  E      + G + E
Sbjct: 39  AEDVVQDAFFRLSTAPQITSSFKAQLSYLFQIVRNLAIDHYRKQAME----LKYSGSEEE 94

Query: 93  -INFKEILLAEAYSPEEESLKKLFWDQLFLALEELPENQRYVFVQNELEERTFQELADES 151
            +N    ++ +  SPE   + +   + +  AL ELP   RY F    L     +++A E 
Sbjct: 95  GMN----VVVQNASPEATHINRAALNDIAEALNELPPRTRYAFEMYRLNGVPQKDIAKEL 150

Query: 152 G 152
           G
Sbjct: 151 G 151