Pairwise Alignments

Query, 183 a.a., RNA polymerase sigma factor from Pedobacter sp. GW460-11-11-14-LB5

Subject, 158 a.a., RNA polymerase sigma-70 factor, ECF subfamily from Pseudomonas putida KT2440

 Score = 53.5 bits (127), Expect = 2e-12
 Identities = 38/160 (23%), Positives = 73/160 (45%), Gaps = 8/160 (5%)

Query: 15  NYGKRLFSFIRGRVNTDEDAEDILQDVWFQLSNQPEAGAIEQISGWLYRVARNKITDKYR 74
           +Y + L SF+  R+ + + AED+  D + ++  +  +  IE    +LYR A N + D++R
Sbjct: 3   HYYRELVSFLSARLGSRQAAEDVAHDAYLRVLERTGSEQIEHPRAFLYRTALNLVVDRHR 62

Query: 75  KQKEESLEDFTFEGEDGEINFKEILLAEAYSPEEESLKKLFWDQLFLALEELPENQRYVF 134
           +Q     E       D  ++  E+            ++K        AL+EL    R  F
Sbjct: 63  RQLVRQAEPLDALDADSRLHSSELQHDLQLDQRLALMQK--------ALDELSRPCRDSF 114

Query: 135 VQNELEERTFQELADESGENIKTLISRKGYAVKHLRNRLQ 174
           +  ++E  + Q++A+  G +   +      A+KH R R++
Sbjct: 115 LLRKIEGLSHQQIAERLGISRSLVEKHIVNAMKHCRVRMR 154