Pairwise Alignments

Query, 502 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

Subject, 471 a.a., RagB/SusD family nutrient uptake outer membrane protein from Pontibacter actiniarum KMM 6156, DSM 19842

 Score = 80.5 bits (197), Expect = 1e-19
 Identities = 123/519 (23%), Positives = 204/519 (39%), Gaps = 86/519 (16%)

Query: 8   LFAGFSLLSITACKKDYLDTKPTDQVDNSALFTSAANAKNALNGVYRYMFERSTTVPDNA 67
           L  G  + S  +C  D ++ +P + +   A+F+S    + A+ G+Y           DN 
Sbjct: 13  LLFGTMVFSTVSC--DVIEKEPIESLSPDAVFSSPERIEKAVIGIY----------DDN- 59

Query: 68  QQNKPGVGG-IMLYMDFMGEDIGISSSNWYTSDGGSWISHRTDNSTLLTYMYRTYYRIIG 126
            QN   +GG  ++Y D  G D   +S       GG  + +   N   +   +   YR I 
Sbjct: 60  -QNPSFLGGRALVYADIRGGDTDPAS-----YFGGVGLFNTLSNDGTVMAAWTGGYRAIY 113

Query: 127 NVNYIIDNIDQASGAAAD---KNIVKAEALTLRGYAYFGLVQLYGKRYDAAAKPNNQLGV 183
             N  +  +++     A     N  +AEA  +R   ++ L+ L+ + Y+  +  ++ LG+
Sbjct: 114 TANLFLQALEENRSKVATVALANQYEAEAKFVRALNHWYLINLFAQPYNFTSDASH-LGI 172

Query: 184 PLLLASTDTNK--------PRATVESVYAAIVSD-----LETAIALNATASNKTHAGATV 230
           P+ L + D +          R+TV  VYA I  D     L   I      SN   A    
Sbjct: 173 PVALKAFDASSAFAPEAQLSRSTVAEVYAQIEKDLLFGELNLPITQGTNFSNVARATRGA 232

Query: 231 AKGIRARVALVMQDYPNAIKYAKDIV----DANQYPLLSVTDYQAGFNNAALGEFIWASM 286
           A+ +  R+ L   +    I+YA  +       N  P+ +  DY                 
Sbjct: 233 AQALLMRLYLYKGENTKVIEYADKVTALGYQLNAAPITAFRDYLT--------------- 277

Query: 287 PTLDQGDTFGSYFAQIAYNANTSFMRGNPKRINSALYDQISATDVRKKMWEPVPTTVNFP 346
                 ++  S     A N NT+   GN        Y   +  D+    +  + T  +  
Sbjct: 278 -----KESIFSVAHNAADNPNTNSSIGNH-------YSPENRGDISISPYHAIATLADSD 325

Query: 347 LPATNFARQPYMSRKFSVKEVGGPSLGDVPLMRTSEMYLILAEAYAKTPGSEAAARTVLF 406
           L  +       + + +++K     +   +P++R  E+ L  AEA A+   +       L 
Sbjct: 326 LRKSTLTTGK-LGKVWTLKFTDATNW--IPVVRYPEVILSKAEALARQSSAVNPEAIELI 382

Query: 407 NLVKQRDPAAVISV---NTGQALINEILFNRRIELWGEGHRWLDLKRLNLPLDRTVVPNY 463
           N +++R  A+  SV    + + LI  IL  RRIEL  EGH   D  RL    D       
Sbjct: 383 NQLRRRAQASEFSVPDFASREELIETILLERRIELAFEGHGIFD--RLRNKKD------- 433

Query: 464 VSASVAGTLTIPAGDVKWQFLIPRAEMEANSGLAGQQNP 502
           + AS   T+  P G  K    IP+ +++AN  L   QNP
Sbjct: 434 IPASSMYTVQ-PYGSNKTILPIPQVDVQANPNLV--QNP 469