Pairwise Alignments

Query, 502 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

Subject, 506 a.a., RagB/SusD family nutrient uptake outer membrane protein from Pontibacter actiniarum KMM 6156, DSM 19842

 Score =  380 bits (977), Expect = e-110
 Identities = 222/506 (43%), Positives = 313/506 (61%), Gaps = 30/506 (5%)

Query: 14  LLSITACKKDYLDTKPTDQVDNSALFTSAANAKNALNGVYRYMFERSTTVPDNAQQNKPG 73
           +L + +C KDYL+ +PTD V      T+  NA  ALNG++R MF +     DN  Q++ G
Sbjct: 13  MLMLASCDKDYLEVQPTDAVAGDLAITTTTNAMAALNGIHRAMFMQY----DN--QDQAG 66

Query: 74  VGGIMLYMDFMGEDIGISSSN--WYTSDGGSWISHRTDNSTLLTYMYRTYYRIIGNVNYI 131
            G +M+ +D +GED+ ++++   W+ S    W++HR  N+  ++++YR YY+II N N I
Sbjct: 67  QGSVMINLDLLGEDVVMTAAGNGWFNSTY-KWMTHRNANAGTVSFVYRFYYKIIANANKI 125

Query: 132 IDNIDQASGAAADKNIVKAEALTLRGYAYFGLVQLYGKRYDAAAKPNNQLGVPLLLASTD 191
           I+ ID A G  A++  +K +AL  R +A+  LVQ++ +RYDA+   N+QLGVP++   T 
Sbjct: 126 IEGIDTAEGTPAERAAIKGQALAYRAWAHHQLVQIFAERYDASKSSNDQLGVPIMNVYTL 185

Query: 192 TNKPRATVESVYAAIVSDLETAIALNATASN-KTHAGATVAKGIRARVALVMQDYPNAIK 250
             +PRATVE VYA I  D++ AI+L     N K+H    VAKGI+ARVAL MQD+  A K
Sbjct: 186 EGQPRATVEQVYAQINKDIDEAISLLPARRNAKSHFNTNVAKGIKARVALTMQDWATAAK 245

Query: 251 YAKDIVDANQYPLLSVTDYQAGFNNAALGEFIWASMPTLDQGDTFGSYFAQIAYNANTSF 310
           +A +   A  Y L+  T Y AGFNN    E++W S    DQ   F SYFA ++ N ++S 
Sbjct: 246 FANEA--AQGYKLMGQTQYLAGFNNVENEEWMWGSDQISDQTTYFYSYFAYMSANFSSSN 303

Query: 311 MRGNPKRINSALYDQISATDVRKKMWEPVPT-------------TVNFPLPATNFARQPY 357
           +R NPK INS LY +I  TDVRK++W+P PT              VN  +  +NF+ +PY
Sbjct: 304 IRANPKAINSQLYSKIPNTDVRKQLWDPTPTEVLDETTKKVVGYDVNGYVIPSNFSPKPY 363

Query: 358 MSRKFSVKEVGGPSLGDVPLMRTSEMYLILAEAYAKTPGSEAAARTVLFNLVKQRDPAAV 417
           M+RKF + + G  S+GDVP MR +EM LI AEA A+  G+ +AA  +L  LVK RD  A 
Sbjct: 364 MNRKF-LADGGASSVGDVPYMRAAEMMLIEAEALARM-GNNSAAAALLTKLVKARDTEAS 421

Query: 418 ISVNTGQALINEILFNRRIELWGEGHRWLDLKRLNLPLDRTVVPNYVSASVAG-TLTIPA 476
                 QALI+EI+  RRIELWGEG R+ DLKR N PL+R    +  SA++AG  L + A
Sbjct: 422 DITLADQALIDEIMKQRRIELWGEGFRFFDLKRTNSPLNRNGANH--SATLAGNVLDVAA 479

Query: 477 GDVKWQFLIPRAEMEANSGLAGQQNP 502
           GD +WQ+LIP+ E+ +N+     QNP
Sbjct: 480 GDNQWQWLIPQDELNSNNNEGMVQNP 505