Pairwise Alignments
Query, 977 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5
Subject, 1466 a.a., response regulator from Phocaeicola dorei CL03T12C01
Score = 127 bits (320), Expect = 4e-33
Identities = 203/942 (21%), Positives = 388/942 (41%), Gaps = 128/942 (13%)
Query: 137 GVIWGIS-EHKLFKI----VKDKIISYS-IAGKNIHTINSDSSGNLYAVVSGSGIYQLKN 190
G IW S ++++F++ VKDK+I+ + I G + + LY S + K
Sbjct: 241 GRIWCYSLQNEIFRLWELPVKDKVIAINEIKGTGLLITTAHEGLILYH----SDTKECKV 296
Query: 191 NNWAIYQELPP----AINTLSIRKILFDKTVKNKIYLLTYRSGIYVLENGIVKPFFKKAG 246
N + E P ++ S ++ F+ T K+ + ++ E V+P G
Sbjct: 297 YNKSNCPEFPADAFRSVYVDSKQEAWFEMTEWGKVCHFNPLTEVFKQEKMQVEP----RG 352
Query: 247 IDTYYS---IAQDHRGNMWVGSEKG--AYFINKTGAVINFNGENGLSD----NQVNEIFS 297
D Y I +D GN+WV + G +++ + ++ F + D N+++ + S
Sbjct: 353 ADRSYPSFHICEDLNGNLWVHPQGGGLSWYDREANRLLPFYNDPDSPDWHFSNKLHSMLS 412
Query: 298 DAENNIWISCFSDGIYK--YEGDAFIRYNRFKGKNL---AYPISGIAADKNDNLWFGTFN 352
D + N+W+ S G+ K + G F Y R G + A + + D +W G +
Sbjct: 413 DKQGNLWLCTHSKGLEKITFLGSQFHIYPRM-GHSYDLNANTVRALFEDSEHRIWMGKRD 471
Query: 353 KGVFKYDGK-DVQNV----DIPAFKDKKI----YFVYADRAKNVWFSTYGQGI------- 396
+ Y D Q + I A + + Y + D N+W +T G GI
Sbjct: 472 GQIEIYSSDLDFQGILTEEGIIAKSGRPLSGVPYHIMQDSRGNIWIATKGDGIILAEKEG 531
Query: 397 --WKYNGQKFSQVLKPERFDNSA--IAEDEEGGIWI----NGLMWTTYLKDGKTERISGF 448
+K+ K+ + NS + ED+ G IW+ GL + +GK IS
Sbjct: 532 AHFKFTRFKYDEDDIYSLSHNSVYWLHEDKHGRIWVATFGGGLNYIQKTPEGKYVFISSR 591
Query: 449 DG-----YLSC--IYPLTKD---SVFLGTSNGITLIKNKKIDK---TFHIKS-------- 487
+ Y C + +T D ++++G+S+G K D FH+ +
Sbjct: 592 NNLKGFPYDRCYRVRHITSDKKGNIWVGSSDGALSFKEDFKDPESIVFHLYARIPDDMNC 651
Query: 488 LSNVYVLSIIKHHDNLIF-ATLGDGI---ITWNLKTKAI-KRYVVANGLNSNDIYSLATD 542
LSN V ++ ++ AT G G+ ++ N + A+ K Y V NGL S+ + S+ D
Sbjct: 652 LSNNNVYRVVTTSQGEVYLATFGGGLNQLVSMNGEGGAVFKSYTVKNGLPSDILLSVEED 711
Query: 543 KKNNLWAGTGRGINKLTFNKQQQSYEVFRDHPLIVECNQNAIINYKNS-ILVGTINGLIQ 601
+LW T G++K ++Q+ RD + + +N +S IL GT G++
Sbjct: 712 DTGSLWISTENGLSKFIPSEQRFENYNERDFGGKIRFEEGTSLNLSSSTILFGTSRGVLY 771
Query: 602 CKTNPTTENKKNPFIHIQQVSVFHKNDRAKDISIDL---SKIGHKFYKLNYSQNHISISF 658
+ ++ P I + + + ++ + +S L S + L++ +N +++SF
Sbjct: 772 FEPEHIKKSNYVPSIILGTLKISNQ-EVVPGVSGSLLRQSLNNTEHLVLSHKENIVTLSF 830
Query: 659 KGVYLTNPESVLYRYKLVGVDNDFSKPVPNTEIEYSAIRPGSYTFQVYAIANG--QQSNI 716
+ + PE++ Y Y+L G D +++ Y+ + G Y FQV + + N
Sbjct: 831 AALDMIYPENIRYAYRLRGFDKEWNYVDRQRTATYTNLPKGDYVFQVKSTNSDGVWVENE 890
Query: 717 EQFSFTIVPPYYDTVIFKIIAFLVLIFLIWLIFYLIFKTRERKKHQFEKLKLKEQEKIRK 776
TI P +++T I L + +++ Y++F T R KH+ + K+R
Sbjct: 891 RSLRITIQPSFWETAWAMAIYILAFLLILFSGVYILF-TIYRLKHEVSVEQQVSDIKLRF 949
Query: 777 QTAEDFHDDIGNKLTRI----------NVLSEILDKKVSGAEKEQKELIRLIRENAGLLY 826
T + ++ LT I L + + +++ E+ ++RL+ N L +
Sbjct: 950 FT--NISHELRTPLTLIAGPVEYVLKNKTLPDDVREQLHVVERNTDRMLRLV--NQILDF 1005
Query: 827 TGTKDILWALDPHSDNLFEILMHIKNFGVDLFQNTGVTFKMEGVLSKYQKLHLSMEFNRN 886
+ L ++ + HI + L + + F E S+ L L ++ ++
Sbjct: 1006 RKIQKNKMKLRIEQIDIVPFVRHIMDNFESLAEEHHIDFVFE---SEMPSLKLWVDADKL 1062
Query: 887 LTLIFKEMLNNVLKHAKASQVLIMVIETDHDTVNILTTDDGAGFD--------------- 931
++F +L+N K+ +++ + I + V I D G G
Sbjct: 1063 EKIVF-NLLSNAFKYTPQGKMITLFIHENEHNVAIGVQDQGIGISESKKASLFVRFENLL 1121
Query: 932 ----IETVQKGRGLNNIQTRCKRIKSTFQISSVKGKGTTTTI 969
G GL+ ++ + K+T ++ S +G+G+ T+
Sbjct: 1122 DKNLFNQQSSGIGLSLVKELVELHKATIRVDSKEGEGSCFTV 1163
Score = 70.1 bits (170), Expect = 1e-15
Identities = 140/627 (22%), Positives = 236/627 (37%), Gaps = 142/627 (22%)
Query: 16 INFIVSFILLFSLKLSAQSYNFTNYSLKDGLPQSQVMVIFQAKDRTLWLGTFGGVSNFDG 75
I FI++ + F K S + FT+YS ++GL Q+ +M + Q + LW T+ G++ F+G
Sbjct: 5 ILFILTLLFFFYAK-SQPNCIFTHYSSENGLSQNSIMSMVQDHNGVLWFSTWDGINRFNG 63
Query: 76 RQFTSYSKADG----LGSNSVNCIAEDNQGQVFFGTETGISILKRGKISTLF-------- 123
F Y G + +N V+ + D ++ T + + + + F
Sbjct: 64 YDFKVYKARQGNKITMTNNRVDLLEVDPYNYIWLQT-YDYRVYRFDQRTEKFEQIPAEGE 122
Query: 124 -SGKGVSHLLKDKEGVIWGISEHKLFKIVKDKIISYSIAGKNIHTINSDSSGNLYAVVSG 182
G S + + VIW +SE++ VK YS+ ++ +S +
Sbjct: 123 EEGMRFSSIKILPDSVIWLLSENEGAVRVKTNPKDYSVT-TQVYATHSHGGNAAHINQVF 181
Query: 183 SGIYQLKNNNWAIYQELPPAINTLSIRKILFDKTVKNKIYLLTYRSGIYVLENGIVKPF- 241
S Y N W + + KI DK + Y + +SG ++ V+ F
Sbjct: 182 SDAY---NQEWLLTDN--------GLLKITNDKE-EPVSYFVNIQSG----KDESVQAFY 225
Query: 242 -FKKAGIDTYYSIAQDHRGNMWVGSEKGAYF----------------INKTGAVINFNGE 284
F G + Y+ RG +W S + F I TG +I
Sbjct: 226 SFCSYGDELYFG---SDRGRIWCYSLQNEIFRLWELPVKDKVIAINEIKGTGLLIT-TAH 281
Query: 285 NGL----SDNQVNEIF---------SDAENNIWISCFSDGIYKY-EGDAFIRYNRF---- 326
GL SD + +++ +DA ++++ + ++ E +N
Sbjct: 282 EGLILYHSDTKECKVYNKSNCPEFPADAFRSVYVDSKQEAWFEMTEWGKVCHFNPLTEVF 341
Query: 327 ---------KGKNLAYPISGIAADKNDNLWFGTFNKGVFKYDGKDVQNVDIPAFKD---- 373
+G + +YP I D N NLW G+ YD + N +P + D
Sbjct: 342 KQEKMQVEPRGADRSYPSFHICEDLNGNLWVHPQGGGLSWYDRE--ANRLLPFYNDPDSP 399
Query: 374 -----KKIYFVYADRAKNVWFSTYGQGIWK--YNGQKFSQVLKPERFDNS---------A 417
K++ + +D+ N+W T+ +G+ K + G +F + P R +S A
Sbjct: 400 DWHFSNKLHSMLSDKQGNLWLCTHSKGLEKITFLGSQFH--IYP-RMGHSYDLNANTVRA 456
Query: 418 IAEDEEGGIWINGLMWTTYLKDGKTERISGFDGYLSCIYPLTKDSVFLGTSNGITLIKNK 477
+ ED E IW+ +DG+ E IY D + T GI +
Sbjct: 457 LFEDSEHRIWMG-------KRDGQIE-----------IYSSDLDFQGILTEEGIIAKSGR 498
Query: 478 KIDKT-FHIKSLSNVYVLSIIKHHDNLIFATLGDGIITWNLKTKAIK--RYVVAN----G 530
+ +HI S N+ AT GDGII + K R+
Sbjct: 499 PLSGVPYHIMQDS----------RGNIWIATKGDGIILAEKEGAHFKFTRFKYDEDDIYS 548
Query: 531 LNSNDIYSLATDKKNNLWAGT-GRGIN 556
L+ N +Y L DK +W T G G+N
Sbjct: 549 LSHNSVYWLHEDKHGRIWVATFGGGLN 575
Score = 38.9 bits (89), Expect = 3e-06
Identities = 51/266 (19%), Positives = 95/266 (35%), Gaps = 79/266 (29%)
Query: 35 YNFTNYSLKD----GLPQSQVMVIFQAKDRTLWLGTFGGVSNF-----DGRQFTSYSKAD 85
+ FT + + L + V + + K +W+ TFGG N+ +G+ S+ +
Sbjct: 534 FKFTRFKYDEDDIYSLSHNSVYWLHEDKHGRIWVATFGGGLNYIQKTPEGKYVFISSRNN 593
Query: 86 GLGSNSVNC-----IAEDNQGQVFFGTETGISILKRGKISTLFSGKGVSHLLKDKEGVIW 140
G C I D +G ++ G+ G K KD E +++
Sbjct: 594 LKGFPYDRCYRVRHITSDKKGNIWVGSSDGALSFKED--------------FKDPESIVF 639
Query: 141 GISEHKLFKIVKDKIISYSIAGKNIHTINSDSSGNLYAVVSGSGIYQLKNNN---WAIYQ 197
H +I D ++ N++ + + S G +Y G G+ QL + N A+++
Sbjct: 640 ----HLYARIPDD---MNCLSNNNVYRVVTTSQGEVYLATFGGGLNQLVSMNGEGGAVFK 692
Query: 198 ELPPAINTLSIRKILFDKTVKNKIYLLTYRSGIYVLENGIVKPFFKKAGIDTYYSIAQDH 257
Y ++NG+ D S+ +D
Sbjct: 693 S--------------------------------YTVKNGLPS--------DILLSVEEDD 712
Query: 258 RGNMWVGSEKG-AYFINKTGAVINFN 282
G++W+ +E G + FI N+N
Sbjct: 713 TGSLWISTENGLSKFIPSEQRFENYN 738
Score = 35.8 bits (81), Expect = 2e-05
Identities = 22/83 (26%), Positives = 42/83 (50%), Gaps = 12/83 (14%)
Query: 37 FTNYSLKDGLPQSQVMVIFQAKDRTLWLGTFGGVSNF--DGRQFTSYSKADGLG------ 88
F +Y++K+GLP ++ + + +LW+ T G+S F ++F +Y++ D G
Sbjct: 691 FKSYTVKNGLPSDILLSVEEDDTGSLWISTENGLSKFIPSEQRFENYNERDFGGKIRFEE 750
Query: 89 SNSVNCIAEDNQGQVFFGTETGI 111
S+N + + FGT G+
Sbjct: 751 GTSLNL----SSSTILFGTSRGV 769
Score = 30.4 bits (67), Expect = 0.001
Identities = 14/33 (42%), Positives = 17/33 (51%)
Query: 525 YVVANGLNSNDIYSLATDKKNNLWAGTGRGINK 557
Y NGL+ N I S+ D LW T GIN+
Sbjct: 28 YSSENGLSQNSIMSMVQDHNGVLWFSTWDGINR 60