Pairwise Alignments

Query, 1028 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

Subject, 1064 a.a., SusC/RagA family TonB-linked outer membrane protein from Pontibacter actiniarum KMM 6156, DSM 19842

 Score =  257 bits (656), Expect = 4e-72
 Identities = 272/1058 (25%), Positives = 445/1058 (42%), Gaps = 128/1058 (12%)

Query: 12   KRVLLLLLCLYLGL--SAYAQTPSVKGVIKD--AKETIVGATVIAQNVQTGIKTTTSSDK 67
            +RVLLL   + L L    YAQ+ +V G + D    + + G  VI +    G  TTT  D 
Sbjct: 2    RRVLLLSFAMVLTLLQQVYAQSRTVSGTVTDQGTSQGLPGVAVIVKGTTVG--TTTGVD- 58

Query: 68   NGVFSFPRLAAGPYKFTINFIGYETKTVTGEVRDGGTFSLSVVLKESSTSLDKDVIVTGT 127
             G +S   + A        FIGY  KTV  E+    T ++++ + +      ++V+V   
Sbjct: 59   -GTYSI-NVPANGNTLIFRFIGY--KTVEREIGSAATINVNLGVDDKQL---EEVVVVAY 111

Query: 128  GITRNKNSFTGVTATFSGETLKSIGNNNIIQSLRTLDPSFILMENNLAGANPNVLPVIEV 187
            G T +K SFTG     S E +      NI  ++         ++ N     P   P I +
Sbjct: 112  G-TADKGSFTGSATQISAEKIAQRPVTNITNAIAGQAAG---VQTNSGSGQPGAGPEIRI 167

Query: 188  RGKTSVPTATLKDQFGTDPNQPLFILDGFETTLQNIVDLDMNRVASVTILKDAASTALYG 247
            RG  S+ ++          N PL+++DG      +I +L+++ + S++ILKDA+STALYG
Sbjct: 168  RGIGSINSS----------NDPLYVVDGTPYP-GSIANLNVDDIESISILKDASSTALYG 216

Query: 248  ARASNGVVVVETIRPKAGQLQFTYSNDFRVESPDLSGYNMMNAAE------KLQFEKL-- 299
            ARA+NGVV++ T + K G  Q        V    +  Y+ +NA E      + Q   L  
Sbjct: 217  ARATNGVVMITTKKGKKGSNQLNVKISQGVSERAIKEYDRVNAYEYYPLIWEAQRNSLVN 276

Query: 300  AGRYNYFVSNATYQQIGLDQIYNNHLAAVKRGV--------------------------- 332
            A +  Y + +A     GL ++ +    +VK G+                           
Sbjct: 277  AAKDPYSLEDANQIASGLKKLRDGKDGSVK-GILGYNPFNVANDAIVDANGNINPEAKLL 335

Query: 333  --DTYWLNEPVQTGITENNSIYAQGGDQAFTYGVGLNYKTQSGAMKGSGRDTWSGNINLT 390
              D  W     ++G   + ++   GG +   Y V L Y  + G +  S  + ++G +N+ 
Sbjct: 336  YDDVDWFEPLQRSGSRSDYALNYSGGSEKSDYFVSLGYLKEKGYVIRSDYERFTGRVNVN 395

Query: 391  -----YRKGKFNINNILYVRGYSSTDSPYGSFSNFVNAN------PYYIKDPSQ-RYL-- 436
                 + +   N++  +     +ST S     + F  A       P Y  DPS   YL  
Sbjct: 396  TQATDWLRTGLNVSGTITESNQASTSSSSSYVNPFNFARGIGPIYPVYAHDPSTGAYLLD 455

Query: 437  ----EVSNTSTYSELKVRNPLYDASLPNTSTAENLEVQNNFQLNYDISSDLQIRGGLQLV 492
                 + +    S L + N   +AS+     AE +   N +  N   +        LQ  
Sbjct: 456  EDGNRIYDYGNLSNLGLPNRGSNASVGRHIVAETMWNDNLYNRNVLSARTFGEVKFLQDF 515

Query: 493  KG----SVTAVSFLAPENSVFEEVGALQRGKYTNSKTDNFSYQGNMLLTYGKVFGGKHSV 548
            K     SV   ++LA E    +       G+ + + T   +Y  N LL Y K F  +H V
Sbjct: 516  KFTTNLSVDIANYLAAEYDNNKVGDGAPAGRASRTSTTATTYNINQLLNYSKTFNDRHFV 575

Query: 549  TANARAEINNRDFRAVGFVAEG-FPEGSTGNPRFAYSYQSNAAPTASSSVYRTANATLSA 607
             A    E  + D++ +  + +G   E +T    F  +   ++     +  YR  +     
Sbjct: 576  EALVGHENYSYDYKYMYGMRQGVIVEDNTELGNFTTTNSLDSR----TDKYRVESYLSRL 631

Query: 608  NYAYDMRYLFDFSYRLDGSTAFGKNKQFSPYWSSGIGWNLNREHFFANTRWINRLKLYAN 667
            NY +D +Y    SYR DGS+ F K+ ++  +WS G  W L+RE F +   W+N LKL  +
Sbjct: 632  NYTFDDKYTLSGSYRRDGSSRFAKDVRWGDFWSVGASWRLDRETFISMPEWVNMLKLRGS 691

Query: 668  IGVTGNQNYGNITSVSVYN-----FNSSTNYNQFGQGVSLATLGNPDLKPQKTTQISAGL 722
             G  GN    N      Y      +    N  +    +    LG+ +L  +       G+
Sbjct: 692  YGEVGNDALLNSDGTDRYYGYQELYTLGMNNAKEPGFLQQDVLGSANLLWESNNSFDIGV 751

Query: 723  DYSLFNDRLFGYVSVYNKRTDPLVVAVDLPSSTGVFNYPLNVGILNNKGMEFKLNYAPIY 782
            ++ LFN R+ G V  +N+ ++ L+  V LP S+GV     N+G + N G+E +L+   + 
Sbjct: 752  EFDLFN-RVSGSVEYFNRESENLLFRVPLPLSSGVKEKWENIGTMANTGVEVQLSTDAVK 810

Query: 783  NIEKRIVWVVGASGNLNKSKYDGFGNALRSLNKQQENNKTLLRFTDGYSPDDIWAAKSLG 842
               +   W V    NLN S    F N L+ L  Q+E      ++  G S  D W     G
Sbjct: 811  T--QDFTWNV----NLNVST---FKNELKKL-PQEEVITGTKKYMVGKSIYDYWLRDWYG 860

Query: 843  IDPATGREMF-----------LRNDGQYTFDYSLGSVQAVGNTNPVIEGIFTSTFSFKGF 891
            +DPA G  +F           + N    T D +       G+  P   G  T+TF++K  
Sbjct: 861  VDPADGAGLFATDTWVEGKTRVINGDTVTTDSNGAKYHYAGSAIPDFAGGITNTFTYKNL 920

Query: 892  NLGVYLRYRLGGDIFNTALYNKVENITYTNIASNQDKRALYDRWQKPGDVAQFKGISQTA 951
            +L V L Y++GG +++ A Y  + N      A ++D   + +RWQ+ GD      +  T 
Sbjct: 921  SLSVLLTYQVGGKVYD-ANYASLMNAGTQGGALHKD---ILNRWQQAGDETDVPRMDLTT 976

Query: 952  TT---PMSSRFVQKENTISGESISMGYTFDRSAWLKKF 986
             T     S R++   + ++  S+++ Y        K F
Sbjct: 977  ATHYNAQSDRWLIDASYLNIRSVNLNYVLPSELTSKVF 1014