Pairwise Alignments

Query, 1028 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

Subject, 1027 a.a., TonB-linked outer membrane protein, SusC/RagA family from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  230 bits (587), Expect = 3e-64
 Identities = 242/1007 (24%), Positives = 428/1007 (42%), Gaps = 106/1007 (10%)

Query: 15  LLLLLCLYLGLSAYAQTPSVKGVIKDAK--ETIVGATVIAQNVQTGIKTTTSSDKNGVFS 72
           L++LL +    S +AQ  +V GV+KD +  + +VG +V+ +    G+ T    D +G +S
Sbjct: 17  LVILLNMVWSFSLFAQGKNVTGVVKDGESGDPLVGVSVLVKGTSKGVVT----DLDGAYS 72

Query: 73  FPRLAAGPYKFTINFIGYETKTVTGEVRDGGTFSLSVVLKESSTSLDKDVIVTGTGITRN 132
              ++        +++GY  K    E+  G    + V L  +++ LD +V++ G G+   
Sbjct: 73  IQDVSTEDV-LMFSYLGYSMK----EIPIGSRSVIDVELVSNTSDLD-EVVIVGYGVQEK 126

Query: 133 KNSFTGVTATFSGETLKSIGNNNIIQSLRTLDPSFILMENNLAGANPNVLPVIEVRGKTS 192
           +N  TG  A+   E ++     + I  L+       +  N+ A   P     I +RG +S
Sbjct: 127 RN-LTGAIASVGSEEVRKTNVQDPISLLQGRAAGVQVTSNSGA---PGGGMTINIRGNSS 182

Query: 193 VPTATLKDQFGTDPNQPLFILDGFE------TTLQNIVDLDMNRVA--------SVTILK 238
           +             N PL+++DG        ++L    +  +N +A        S+ ILK
Sbjct: 183 LNAG----------NNPLYVVDGVPIETNVTSSLNGSENFGLNPLAAINPADIESIEILK 232

Query: 239 DAASTALYGARASNGVVVVETIRPKAGQLQFTYSNDFRVESPDLSGYNMMNAAEKLQFEK 298
           DA+STA+YG+RA+NGVV++ T R K G+ Q     +  V S       +     KL    
Sbjct: 233 DASSTAIYGSRAANGVVLITTKRGKDGKAQI----NLNVHS------GVSQITRKLDVLN 282

Query: 299 LAGRYNYFVSNATYQQIGLDQIYN--NHLAAVKRGVDTYWLNEPVQTGITENNSIYAQGG 356
            +   +  + +      G + I+   + L++   G D  W  E ++  +  +  +  QGG
Sbjct: 283 ASQYRSAVLDSYANSDDGREPIFAVVDSLSSTNNG-DVDWQRELLRKAVQTSVDLSVQGG 341

Query: 357 DQAFTYGVGLNYKTQSGAMKGSGRDTWSGNINLTYR-KGKFNIN-NILYVRGYSSTDSPY 414
            +   Y    ++  Q G +  S     +  +N+ +    +  +  +I Y  G ++  +  
Sbjct: 342 SENVRYAWSSSFLDQDGIVLNSNYRRITSRLNVDFNVTDRLTVGQSISYSNGVNNRINAA 401

Query: 415 GSFSNFVNANPYYIKDPS-QRYLEVSNTSTYSELKVRNPLYDASLPNTSTAENLEVQNNF 473
           G+  N        I+ PS   YL   + + Y   K RNP+  A L       N  +   +
Sbjct: 402 GT-GNLSIIRELLIRPPSYSMYLPDGSLNGYQFGK-RNPVGLAELSTNLNKSNRIIAGQY 459

Query: 474 QLNYDISSDLQIRGGLQLVKGSVTAVSFLAPENSVFEEVGALQRGKYTNSK---TDNFSY 530
            L Y ++  L+ R  +         V FL+ +   F       R  Y       T+N ++
Sbjct: 460 -LEYKLAEGLKFRTSVN--------VDFLSMKEDTFIPSTLDYREGYNTGSVRSTNNLTW 510

Query: 531 QGNMLLTYGKVFGGKHSVTANARAEINNRDFRAVGFVAEGFPEGSTGNPRFAYSYQSNAA 590
               +LTY K   GKH++         + D+   G     FP         A +  +   
Sbjct: 511 SNENILTYQKQVDGKHNLGGLLGFSYQDWDYERTGLDGMFFPSDDIRTLNGAGTISNQEV 570

Query: 591 PTASSSVYRTANATLSANYAYDMRYLFDFSYRLDGSTAFGKNKQFSPYWSSGIGWNLNRE 650
             A+S    +    +S  Y Y+ RYLF+ + R DGS+ FG++ +F  + S+ +GW  + E
Sbjct: 571 NIATSHSLLSYFGRVS--YDYERRYLFEANLRADGSSRFGRDNRFGFFPSASVGWRFSDE 628

Query: 651 HFFANTRWINRLKLYANIGVTGNQNYGNITSVSVYNFNSSTNYNQFGQGVSLATLGNPDL 710
            F      ++  KL  + G TGN+  GN TS     F    NY  +  G +   + N  L
Sbjct: 629 PFLNGAGVLDDGKLRFSAGQTGNEAIGNYTSQG--EFMVGANYLDY-SGAAPTVMPNSGL 685

Query: 711 KPQKTTQISAGLDYSLFNDRLFGYVSVYNKRTDPLVVAVDLPSSTGVFNYPLNVGILNNK 770
             + TTQ +AG+D + +  RL   V  Y K T  L+  V +P  TG      N+G + NK
Sbjct: 686 SWETTTQYNAGMDLAFWQGRLGLTVDAYIKDTKDLLYNVPIPRETGFGYITQNIGKIRNK 745

Query: 771 GMEFKLNYAPIYNIEKR-IVWVVGASGNLNKSKYDGFGNALRSLNKQQENNKTLLR---- 825
           G+E  LN    +N+  R   W    + + N +        L +    Q  N  +L+    
Sbjct: 746 GIEVLLN---THNVATRHFTWSTSLNISKNTNIVKELPEELLTNGFIQNGNFHILQEGYP 802

Query: 826 --FTDGYSPDDIWAAKSLGIDPAT----------GREMFLRNDGQYTFDYSLGSVQAVGN 873
                G+  D ++A     I+  T          G  ++   +G    D +    Q +GN
Sbjct: 803 IGTFYGWRFDGVYARDEDNINGVTNGSQGPVFEGGDPIWHDLNGDNVIDQN--DRQVIGN 860

Query: 874 TNPVIEGIFTSTFSFKGFNLGVYLRYRLGGDIFNTALYNKVENITYTNIASNQDKRALYD 933
             P   G  T+  S+K F+L    ++  GG+I++   + +   + Y N+++     A  D
Sbjct: 861 ATPDFFGGITNDLSYKNFSLSFMFQFSYGGEIYSEINHQRNSIVRYNNLST-----AALD 915

Query: 934 RWQKPGDVAQFKGISQ----TATTPMSSRFVQKENTISGESISMGYT 976
           RW++ GD+  F    Q     + + + SR+V+  + I  +++++ Y+
Sbjct: 916 RWREQGDITDFPKPVQDDPLQSDSRIQSRWVEDGSYIKLKNVNLRYS 962