Pairwise Alignments

Query, 1028 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

Subject, 1034 a.a., TonB-linked outer membrane protein, SusC/RagA family from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  222 bits (565), Expect = 1e-61
 Identities = 259/1055 (24%), Positives = 430/1055 (40%), Gaps = 138/1055 (13%)

Query: 12   KRVLLLLLCLYLGLSAYAQTPSVKGVIKDAKET-IVGATVIAQNVQTGIKTTTSSDKNGV 70
            K V+LL+L L   LS  AQ  SV G++ D     + GA V  +    G+ T    D    
Sbjct: 23   KWVVLLVLVLVAHLSK-AQNVSVSGMVLDENGLGLPGAAVQEKGTTNGVVTGLDGD---- 77

Query: 71   FSFPRLAAGPYKFTINFIGYETKTVTGEVRDGGTFSLSVVLKESSTSLDKDVIVTGTGIT 130
              +            +F+GY+ + +T     G   S+ V L+    SLD +V+V G G  
Sbjct: 78   --YTIAVQEGATLVFSFLGYKPQEITV----GNQTSIDVELEPDMGSLD-EVVVVGYGTL 130

Query: 131  RNKNSFTGVTATFSGETLKSIGNNNIIQSLRTLDPSFILMENNLAGANPNVLPVIEVRGK 190
            R + + TG  A+  G+ ++ + + N+ Q+L+   P   + + +     P     I +RG 
Sbjct: 131  RQE-AVTGSVASIDGDQMREVASANVTQALQGRLPGVDISQTS---TQPGATMQIRIRGN 186

Query: 191  TSVPTATLKDQFGTDPNQPLFILDGFETTLQNIVDLDMNRVASVTILKDAASTALYGARA 250
             S+          T  N PL +L+G      +I D++   + S+ +LKDA++TA+YG+R 
Sbjct: 187  RSL----------TASNDPLIVLNGIPFA-GSIGDINPEDIESIDVLKDASATAIYGSRG 235

Query: 251  SNGVVVVETIRPKAGQLQFTYSNDFRVESPDLSGYNMMNAAEKLQFEKLAGRYNYFVSNA 310
            +NGV+++ T +   GQ+     N F       + Y MMN  E +   + AG Y       
Sbjct: 236  ANGVILITTKKGTKGQVAKVSYNGFYGPKAVFAKYPMMNGPEFIAMREAAGLYTN----- 290

Query: 311  TYQQIGLDQIYNNHLAAVKRGVDTYWLNEPVQTGITENNSIYAQGGDQAFTYGVGLNYKT 370
                 G D+            V+T W +   QTG+  ++ +   GG +  TY  G+ Y  
Sbjct: 291  -----GADE---------SNDVNTDWQDLFYQTGVMTSHDVNVTGGGERSTYSFGVGYYH 336

Query: 371  QSGAMKGSGRDTWSGNINLTYRKGK-----FNINNILYVRGYSSTDSPYGSFSNFVNANP 425
              G +     D +S   ++    G+     FN N+  Y     S    Y + S    A+P
Sbjct: 337  DEGVVPTQQYDRFSLRASVDQEIGRYFRIGFNSNSN-YNERQGSQVGLYNTLSMSPIASP 395

Query: 426  YYIKDPSQRYLEVSNTSTYSELK-VRNPLYDASLPNTST---------------AENLEV 469
            Y      +R + +    ++   K V N + D  L  T                  + L+ 
Sbjct: 396  YEDDGTPRRTINMPLDESWVMTKDVLNNVQDQWLNETRAYATYNALYGEFKIPGVDGLKY 455

Query: 470  QNNFQLNYDISSDLQIRGGLQLVKGSVTAVSFLAPENSVFEEVGALQRGKYTNSKTDNFS 529
            + N  L+Y  S+  +  G     KG    ++   PE      VG        NS T ++ 
Sbjct: 456  RMNVGLDYRQSNQGEYTG-----KG----INSANPETPSTAAVG--------NSHTYHWI 498

Query: 530  YQGNMLLTYGKVFGGKHSVTANARAEINNRDFRAVGFVAEGFPEGSTGNPRFAYS---YQ 586
             +   LLTY K F  KH V   A        +      A   P          Y+    Q
Sbjct: 499  VEN--LLTYDKTFADKHIVNVTALYSAEQNKYYRSRMSARDIPSDQFQFYNLGYANGEIQ 556

Query: 587  SNAAPTASSSVYRTANATLSANYAYDMRYLFDFSYRLDGSTAFGKNKQFSPYWSSGIGWN 646
             N        ++   +      Y+YD RY+   + R DGS+      ++  Y +   GWN
Sbjct: 557  VNPGDQ-QYQLWGLKSVMGRVMYSYDDRYMISATLRSDGSSRLAPGHKWHTYPAISAGWN 615

Query: 647  LNREHFFANTRWINRLKLYANIGVTGNQN---YGNITSVSV--YNFNSSTNYNQFGQGVS 701
            +  E F +   ++N LKL A  G T NQ    Y  +  +    YN+ + T    +  G  
Sbjct: 616  IGDESFMSGVPFVNMLKLRAGYGQTSNQAIAPYATLGGLGTRPYNYGNDT----YATGYF 671

Query: 702  LATLGNPDLKPQKTTQISAGLDYSLFNDRLFGYVSVYNKRTDPLVVAVDLPSSTGVFNYP 761
            +  L NP+L  + +  ++ GLD+ LFN RL G V  Y   T  +++ V+LP + GV +Y 
Sbjct: 672  VNALPNPNLGWEYSETLNLGLDFRLFNHRLSGTVEYYVTNTKDILLGVNLPGTAGVSSYT 731

Query: 762  LNVGILNNKGMEFKLNYAPIYNIEKRIVWVVGASGNLNKSKYDGFGNALRSLNKQQENNK 821
             N+G   NKG+E  LN   I + +    W   A  NL  ++     N L SL   Q+ ++
Sbjct: 732  ANIGETQNKGVEVSLNGTIIESND----WTWEAGVNLYANR-----NELVSLASGQKRDE 782

Query: 822  TLLRFTDGYSPDDIWAAKSLGI----DPATGREMFLRNDGQYTFDYSLG------SVQAV 871
                F  G+  + I+  +  G+    DP         N G     Y+ G        +A+
Sbjct: 783  GNWWFV-GHPINVIYDYEYQGLWQEGDPYRDVLEPGGNLGMIKVKYTGGYEEDGTPSRAI 841

Query: 872  G-------NTNPVIEGIFTSTFSFKGFNLGVYLRYRLGGDIFNTALYNKVENITYTNIAS 924
            G       +  P   G F +  ++K F+L +   ++ GG + +T       +  Y N+ S
Sbjct: 842  GPDDRQILDLQPNFMGGFNTRVAYKNFDLSLVGAFKSGGILISTL----HSSTGYLNMLS 897

Query: 925  NQDKRALYDRWQKPGDVAQF--KGISQTATTPMSSRFVQ--KENTISGESISMGYTFDR- 979
             +      D W      A++   G   +   P     +     + +   ++++GY F+R 
Sbjct: 898  GRRNNVQVDYWTPDNTGARYPAPGGLASGDNPKYGNTLGYFDASYLKIRTMTLGYNFNRE 957

Query: 980  SAWLKKFGMRSLNL-SALTNDIFRISSVKRERGID 1013
            S W+ K G+    + +++ N     S   +E G+D
Sbjct: 958  SNWMDKAGISRFRMYASVQNPFVLFSPFHKESGMD 992