Pairwise Alignments

Query, 1028 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

Subject, 1054 a.a., TonB-linked outer membrane protein, SusC/RagA family from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  236 bits (602), Expect = 6e-66
 Identities = 259/1059 (24%), Positives = 440/1059 (41%), Gaps = 163/1059 (15%)

Query: 12  KRVLLLLLCLYLGLSAYAQTPSVKGVIKDAKET--IVGATVIAQNVQTGIKTTTSSDKNG 69
           K +L L+L L+   S +AQ+ +V G +   +E   + G  V+ +    G  T    D +G
Sbjct: 3   KSLLSLILALFTISSVWAQSRTVTGKVTSEEEPNGMPGVNVLVKGTTVGGIT----DLDG 58

Query: 70  VFSFPRLAAGPYKFTINFIGYETKTVTGEVRDGGTFSLSVVLKESSTSLDKDVIVTGTGI 129
           V++   + AG      +FIGY ++    E+  G   +++V L   + +L+ +VIV   G 
Sbjct: 59  VYTI-EVPAGQNTLVFSFIGYSSQ----EINIGNQSTVNVTLSPDTQNLE-EVIVVAYG- 111

Query: 130 TRNKNSFTGVTATFSGETLKSIGNNNIIQSLRTLDPSFILMENNLAGANPNVLPVIEVRG 189
           +  K +F G            I N  I      L+     +    A   P   P + +RG
Sbjct: 112 SAEKGNFAGSAVAIKEA---KIANRPINSVTNVLEGQAAGVITTSASGQPGESPTVRIRG 168

Query: 190 KTSVPTATLKDQFGTDPNQPLFILDGFETTLQNIVDLDMNRVASVTILKDAASTALYGAR 249
             SV  +            PL+++DG   +  +I +L+ N +A VT+LKDA+S+ALYGAR
Sbjct: 169 IGSVNAS----------QNPLYVVDGVPYS-GDISNLNPNDIADVTVLKDASSSALYGAR 217

Query: 250 ASNGVVVVETIRPKAGQLQFTYSNDFRVESPDLSGYNMMNAAE----------------- 292
           A+NGV+++ T +  A +  F  S    V S  L  Y+ +NAA+                 
Sbjct: 218 AANGVIMITTKKGGAKKSTFNLSVRQGVSSRALPEYDRVNAAQYYPLVWESLKHGQMTSN 277

Query: 293 --------KLQFEKLAGRYNYFVSNATYQQI-GLDQIYNNHLAAVKRGVDTYWLNEPVQT 343
                   +   E L  +  Y + N    QI GLD   N++  AV    D  W +E + T
Sbjct: 278 GLEDGAASQYASENLIEQLGYNIYNVPNDQIVGLDGTLNSN--AVNNFTDLDWYDELIGT 335

Query: 344 GITENNSIYAQGGDQAFTYGVGLNYKTQSGAMKGSGRDTWSGNINLTYRKG---KFNIN- 399
           G     ++   GG +   +   + Y  + G +  +  + ++G IN+  +     K  IN 
Sbjct: 336 GNRGEYNMTYSGGTEKTDFYTSVGYLNEKGFLLKTDIERFTGRINVNTQATDWFKTGINL 395

Query: 400 -------NILYVRGYSSTDSPYGSFSNFVNANPYYIKDP----------SQRYLEVSNTS 442
                  N     G SS  +P+    N     P Y+++            QR  +  + +
Sbjct: 396 SATMADGNNSRTSGNSSYVNPFFFARNMGPIYPVYLQNQQTGGYILDANGQRIYDTGDMT 455

Query: 443 ----------------TYSELKVRNPLYDASLPNTSTAENLEVQNNFQLNYDISSDLQIR 486
                              E  +   LYD  + +      +    +F L  +IS+D+   
Sbjct: 456 DLGSVRRGPGASVGRHVVQETLLNEDLYDRDVISARAYAEVSFLKDFTLRTNISTDMISH 515

Query: 487 GGLQLVKGSVTAVSFLAPENSVFEEVGALQRGKYTNSKTDNFSYQGNMLLTYGKVFGGKH 546
            G++              +N +  +     R   TN + +  ++  N +L+Y   F  KH
Sbjct: 516 LGIEY-------------DNKIVGDGAPAGRANRTNVRRNALTF--NQILSYANTFNTKH 560

Query: 547 SVTANARAEINNRDFR-AVGFVA--EGFPEGSTGNPRFAYSYQSNAAPTASSSVYRTANA 603
                   E  N D++    ++A  E   +G+     F  +    +A       YR  + 
Sbjct: 561 YFEGLVAHE--NYDYKYNYQYLAKQEQILDGNIEPDNFVVT----SAADGRVDTYRIESY 614

Query: 604 TLSANYAYDMRYLFDFSYRLDGSTAFGKNKQFSPYWSSGIGWNLNREHFFANTRWINRLK 663
               NY YD +Y    S R DGS+ F ++ ++  +WS    WN+ +  FF N  + + LK
Sbjct: 615 FSRFNYVYDDKYSLSASIRTDGSSRFYEDVRWGTFWSVAGAWNIEKGAFF-NADFFDMLK 673

Query: 664 LYANIGVTGNQNYGNITSVSVYNFN---SSTNYNQFGQGVSLATLGNPDLKPQKTTQISA 720
           L A+ G  GN    + +S + Y +    +  N N    G+   +L   +L  +       
Sbjct: 674 LRASYGEVGNDGLLSGSSQNYYPWQALYNLDNNNALEPGILQGSLSALELLWESNNTFDV 733

Query: 721 GLDYSLFNDRLFGYVSVYNKRTDPLVVAVDLPSSTGVFNYPLNVGILNNKGMEFKLNYAP 780
           GLD++ F  R  G +  Y + ++ L+  V L  +TG+ + P+N+G + N G+EF++    
Sbjct: 734 GLDFA-FAKRFSGTLEYYYRVSENLLFDVPLSLTTGLESRPINIGTMANSGVEFQIQGDI 792

Query: 781 IYNIEKRIVWVVGASGNLNKSKYDGFGNALRSLNKQQENNKTLLRFTDGYSPDDIWAAKS 840
           I N  +   W    + NLN S    F N  + L   ++ N T  ++  G S  D W    
Sbjct: 793 IRN--QDFTW----NANLNVST---FTNKFKKLPFDEQINGT-KKYVVGRSIYDYWLRDW 842

Query: 841 LGIDPATGREMFLRND-----------------GQYTFDYSLGSVQAVGNTNPVIEGIFT 883
            G+DP TG  ++  N+                    T +Y        G   P   G   
Sbjct: 843 RGVDPETGYGLYTANEYLNQNGEVRDDVMIVGTDTLTTEYDNAKQHFAGTAIPDFSGGLA 902

Query: 884 STFSFKGFNLGVYLRYRLGGDIFNTALYNKVENITYTNIASNQDKRALY----DRWQKPG 939
           +TFS+K F L V + + +GG+I++  LY  +       ++S+ D  AL+     RWQ+PG
Sbjct: 903 NTFSYKNFELSVLVSFSVGGEIYD-GLYASL-------MSSSPDGDALHTDALGRWQQPG 954

Query: 940 DVA---QFKGISQTATTPMSSRFVQKENTISGESISMGY 975
           DV    +   I+ T T   S R++   + ++  SI++ Y
Sbjct: 955 DVTDVPRMDNINSTETNGSSDRWLIDRSYLNLRSINLSY 993