Pairwise Alignments

Query, 182 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

Subject, 181 a.a., RNA polymerase sigma-70 factor, Bacteroides expansion family 1 from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 77.4 bits (189), Expect = 1e-19
 Identities = 49/162 (30%), Positives = 88/162 (54%), Gaps = 5/162 (3%)

Query: 7   LASGCLQTFQTVYRLFNQKLYAYVLKKTGSVYMAEEVVQLTFIKLWEKRENLSMEYSLSA 66
           +  G    F  VY  + ++L+    K+     + E +VQ  F+++W+KR +L +  SL A
Sbjct: 12  IKKGNEMAFVEVYDKYWKQLFNSGYKRFQKKEIVEGLVQEVFVEMWQKRASLMVHTSLGA 71

Query: 67  QIFRIAGTILIDQLRKEAVGKKHLTLVENDYA-LRTEVDQP----EVHHALEQAIEQMAP 121
            +F      +I+Q++ + V +K++  V +  +   +EV++     E+  A +Q I  +  
Sbjct: 72  YLFTALKYKVINQMKSQMVKEKYVAFVTSRKSNFGSEVEEKIFYKELDEAYKQEIANLPS 131

Query: 122 VRKKVFKLSKVEGYSYKEIAEMLSISPKTVENHISQALKQLR 163
             K+V++L   EG SY EI++ + IS  TVE H+ +ALK LR
Sbjct: 132 QAKRVYELKNTEGLSYVEISQEMGISVSTVEKHMIKALKILR 173