Pairwise Alignments

Query, 182 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

Subject, 193 a.a., RNA polymerase sigma-70 factor, Bacteroides expansion family 1 from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 68.9 bits (167), Expect = 5e-17
 Identities = 47/167 (28%), Positives = 83/167 (49%), Gaps = 6/167 (3%)

Query: 7   LASGCLQTFQTVYRLFNQKLYAYVLKKTGSVYMAEEVVQLTFIKLWEKRENLSM----EY 62
           L  G    F  ++  + ++LYAY         + E+ VQ  FI LW+  +  ++     Y
Sbjct: 17  LKQGDNAAFHVIFDRYWKRLYAYAYNVYRDEGVCEDCVQEIFISLWQNNKTTNILHLESY 76

Query: 63  SLSAQIFRIAGTILIDQLRKEAVGKKHLTLVENDYALRTEVDQPEVHHALEQAIEQMAPV 122
              +  ++++G I   +L+ + V  + L  + +  +  T ++  E+   L   I ++   
Sbjct: 77  LFKSIKYKLSGHI--KKLKFDLVHDEALKQLSSPESESTTIEYQELEETLTSQINKLTGK 134

Query: 123 RKKVFKLSKVEGYSYKEIAEMLSISPKTVENHISQALKQLRAAFSSI 169
             +VF LS+++  +  EIAE L+IS +TVE+HIS ALK LR     I
Sbjct: 135 CHEVFVLSRLQNKTNSEIAEELNISKRTVESHISNALKLLRTNLREI 181