Pairwise Alignments

Query, 182 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

Subject, 193 a.a., RNA polymerase sigma-70 factor from Phocaeicola dorei CL03T12C01

 Score = 77.4 bits (189), Expect = 1e-19
 Identities = 53/165 (32%), Positives = 92/165 (55%), Gaps = 13/165 (7%)

Query: 7   LASGCLQTFQTVYRLFNQKLYAYVLKKTGSVYMAEEVVQLTFIKLWEKRENLSMEYSLSA 66
           + +G  + F T++R +   L AY   K   +  AEE VQ   + LWE ++ L ++ SLS 
Sbjct: 16  IKNGNEKAFDTLFRKYYPMLCAYG-NKFVELEDAEECVQDAMLWLWENKDMLVIQSSLSN 74

Query: 67  QIFRIAGTILIDQLRKEAVGKKHLTLVENDY--ALRTEVDQP------EVHHALEQAIEQ 118
            +F I     I++++++ V  +    VEN +   +++ +D        E+   +++A+E 
Sbjct: 75  YLFSIVHHRAINRIKQQEVKSR----VENYFYEEMQSLIDDTNFYLIEELTIRIQEAVET 130

Query: 119 MAPVRKKVFKLSKVEGYSYKEIAEMLSISPKTVENHISQALKQLR 163
           +    K+ F + + +  SYKEIAE+L +SPKT++  I QALKQLR
Sbjct: 131 LPESYKEAFVMHRFKNMSYKEIAEILGVSPKTIDYRIQQALKQLR 175