Pairwise Alignments

Query, 182 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

Subject, 183 a.a., RNA polymerase sigma-70 factor from Phocaeicola dorei CL03T12C01

 Score = 80.9 bits (198), Expect = 1e-20
 Identities = 47/170 (27%), Positives = 85/170 (50%), Gaps = 6/170 (3%)

Query: 7   LASGCLQTFQTVYRLFNQKLYAYVLKKTGSVYMAEEVVQLTFIKLWEKRENLSMEYSLSA 66
           +  G ++ F+ V+R +   L  Y +  TGS+  AEE+V+  F  +W  RE L +  S+ +
Sbjct: 11  IREGDIKAFEDVFRRYYSPLCWYAMSITGSMEAAEEIVEELFYGVWRDRERLPLFRSMKS 70

Query: 67  QIFRIAGTILIDQLRKEAVGKKHLTLV------ENDYALRTEVDQPEVHHALEQAIEQMA 120
            ++               V  K+   V        D + + E++  E+ H ++  + +M 
Sbjct: 71  YLYIAVRNQSFQYCEHLEVRNKYREFVLSRKGRTQDSSPQEEIEYQELRHLIDTTLARMP 130

Query: 121 PVRKKVFKLSKVEGYSYKEIAEMLSISPKTVENHISQALKQLRAAFSSII 170
             R ++F++ ++EG  Y EIA  LS+S KTVE  +++ALK L+    + I
Sbjct: 131 ERRLRIFRMHRMEGKKYAEIASQLSLSVKTVEAEMTKALKALKKEIENYI 180