Pairwise Alignments

Query, 182 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

Subject, 196 a.a., RNA polymerase sigma-70 factor from Phocaeicola dorei CL03T12C01

 Score = 82.8 bits (203), Expect = 3e-21
 Identities = 51/171 (29%), Positives = 90/171 (52%), Gaps = 6/171 (3%)

Query: 6   DLASGCLQTFQTVYRLFNQKLYAYVLKKTGSVYMAEEVVQLTFIKLWEKRENLSMEYSLS 65
           DL  G    F  V+  +N+ LY    +   S   AE+ +Q  F+KLWE+R N S E  + 
Sbjct: 14  DLRRGKEYAFAAVFERYNRLLYTIAYRFLKSEEEAEDAIQYLFMKLWEQRTNFSFESGIR 73

Query: 66  AQIFRIAGTILIDQLRKEAVGKKHLTLV------ENDYALRTEVDQPEVHHALEQAIEQM 119
           + +F I    ++++LR  ++  + L  +      E++    T+ +  E+   L  AI+++
Sbjct: 74  SLLFTILKNYILNELRHRSLVFEKLYEMAQQVNDEDEDDFLTQFENGELGKFLRVAIDKL 133

Query: 120 APVRKKVFKLSKVEGYSYKEIAEMLSISPKTVENHISQALKQLRAAFSSII 170
            P ++K+  L    G S +EIA+ + I+  TV++H +QA+K LR    S+I
Sbjct: 134 PPQKQKICLLKIEYGLSNQEIADRMGITVPTVKSHYTQAIKALRNEIESLI 184