Pairwise Alignments

Query, 182 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

Subject, 191 a.a., RNA polymerase sigma-70 factor from Phocaeicola dorei CL03T12C01

 Score = 78.6 bits (192), Expect = 6e-20
 Identities = 54/177 (30%), Positives = 91/177 (51%), Gaps = 13/177 (7%)

Query: 14  TFQTVYRLFNQKLYAYVLKKTGSVYMAEEVVQLTFIKLWEKRENLSMEYSLSAQIFRIAG 73
           T++ V+R    KL  Y  +  G+   AE+VVQ  F++LW +R+++ +   + A ++R   
Sbjct: 8   TYKAVFRQCYPKLLFYATRLVGTEE-AEDVVQDVFVELWRRRDSVVIGEQILAFLYRSVY 66

Query: 74  TILIDQLRKEAVGKKHLTLVENDYALRTEVDQP------------EVHHALEQAIEQMAP 121
           T  I+ L+ + +   +   +   Y  + +  QP            E+   + +AI ++  
Sbjct: 67  TKAINLLKHQVIENNYSAAMIEIYERKLQYYQPDHAEVIKKIENQELRQEIFEAINELPD 126

Query: 122 VRKKVFKLSKVEGYSYKEIAEMLSISPKTVENHISQALKQLRAAFSSIISLAIIMSA 178
             K+VFKLS +     KEIA+ L IS +TVE H+ +ALK LR   S ++   II SA
Sbjct: 127 KCKEVFKLSYLHDMKNKEIADTLGISLRTVEAHMYKALKFLRERLSHLLLSLIIFSA 183