Pairwise Alignments

Query, 192 a.a., RNA polymerase subunit sigma-70 from Pedobacter sp. GW460-11-11-14-LB5

Subject, 193 a.a., RNA polymerase sigma-70 factor, Bacteroides expansion family 1 from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  110 bits (274), Expect = 2e-29
 Identities = 67/179 (37%), Positives = 101/179 (56%), Gaps = 9/179 (5%)

Query: 5   STHKDSELYDLLKQGDKNAFVEIFERYYNLLIIYADKKLRNRQEAEDVVQEVYVSLWNRH 64
           +T  D +L   LKQGD  AF  IF+RY+  L  YA    R+    ED VQE+++SLW  +
Sbjct: 6   NTISDHQLLSRLKQGDNAAFHVIFDRYWKRLYAYAYNVYRDEGVCEDCVQEIFISLWQNN 65

Query: 65  ESINIESSLASYLYRAVRYEILDIFSHQK---VEDKYLQSLDTYAKNFSEQADYRVREKE 121
           ++ NI   L SYL+++++Y++       K   V D+ L+ L +      E     +  +E
Sbjct: 66  KTTNI-LHLESYLFKSIKYKLSGHIKKLKFDLVHDEALKQLSS-----PESESTTIEYQE 119

Query: 122 IIEIINKQIDLLPTKMKEVFLLSRKENLSHREIAEVLGTTEENVSRHITRALKILRTKL 180
           + E +  QI+ L  K  EVF+LSR +N ++ EIAE L  ++  V  HI+ ALK+LRT L
Sbjct: 120 LEETLTSQINKLTGKCHEVFVLSRLQNKTNSEIAEELNISKRTVESHISNALKLLRTNL 178