Pairwise Alignments

Query, 192 a.a., RNA polymerase subunit sigma-70 from Pedobacter sp. GW460-11-11-14-LB5

Subject, 193 a.a., RNA polymerase sigma-70 factor from Phocaeicola dorei CL03T12C01

 Score = 95.1 bits (235), Expect = 7e-25
 Identities = 54/179 (30%), Positives = 103/179 (57%), Gaps = 7/179 (3%)

Query: 16  LKQGDKNAFVEIFERYYNLLIIYADKKLRNRQEAEDVVQEVYVSLWNRHESINIESSLAS 75
           LKQG   AF +I++ Y   L  Y+ +  ++ +E+E++VQEV+V LW+   +I  + +L S
Sbjct: 16  LKQGSHKAFDKIYQMYSKRLYAYSLQFTKSSEESEEIVQEVFVKLWSNRINIRQDETLRS 75

Query: 76  YLYRAVRYEILDIFS---HQKVEDKYLQSLDTYAKNFSEQADYRVREKEIIEIINKQIDL 132
            L+   ++ +++ +    +  + ++Y+  +DT +   +E   Y++   E +    K I+ 
Sbjct: 76  LLFIMAKHRLINAYRQKINHPIYEEYIYHIDTLS---TEDTHYKLEYNEFLFRFLKTIEK 132

Query: 133 LPTKMKEVFLLSRKENLSHREIAEVLGTTEENVSRHITRALKILRTKLG-LFIFLYMLF 190
           LP   ++V  LSR + LS++EIAE L  +E+ V   ++  LK L+ KL  +++ L +LF
Sbjct: 133 LPDTQQKVIRLSRFKQLSNKEIAEKLSLSEQTVKNQLSLGLKTLKEKLNKIWLLLMLLF 191