Pairwise Alignments

Query, 192 a.a., RNA polymerase subunit sigma-70 from Pedobacter sp. GW460-11-11-14-LB5

Subject, 200 a.a., RNA polymerase sigma-70 factor from Phocaeicola dorei CL03T12C01

 Score =  108 bits (269), Expect = 8e-29
 Identities = 59/176 (33%), Positives = 97/176 (55%)

Query: 9   DSELYDLLKQGDKNAFVEIFERYYNLLIIYADKKLRNRQEAEDVVQEVYVSLWNRHESIN 68
           + EL   L  GDK AF  +F  Y + ++ Y    +++++ AED+ Q++++++W + E I 
Sbjct: 8   ERELIRKLINGDKIAFSHLFSFYKSQVLYYCVHFVKDKEIAEDITQDIFLTVWEKKEDIR 67

Query: 69  IESSLASYLYRAVRYEILDIFSHQKVEDKYLQSLDTYAKNFSEQADYRVREKEIIEIINK 128
           IE S +++LY   R  I DIF          + L   A ++ +  +  + EK I E+I +
Sbjct: 68  IEQSFSAFLYTIARNRIYDIFRSLSARSVLYEKLMEQAIDYVDDVEKSLEEKNIQELIAQ 127

Query: 129 QIDLLPTKMKEVFLLSRKENLSHREIAEVLGTTEENVSRHITRALKILRTKLGLFI 184
            ++ L  + +E+F LSR   LSH+EIAE LG +   V  HI  AL+ +R  L  FI
Sbjct: 128 ALEQLSPRQREIFELSRNRGLSHKEIAEQLGLSVYTVQDHIKNALEKIRVYLIPFI 183