Pairwise Alignments

Query, 1126 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

Subject, 1027 a.a., TonB-linked outer membrane protein, SusC/RagA family from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  378 bits (970), Expect = e-108
 Identities = 309/1014 (30%), Positives = 468/1014 (46%), Gaps = 92/1014 (9%)

Query: 130  VSGKVVD-ENGSPLSGASVVLKANGKGTSTTVDGTFTMSGVDDGAILVIKYIGFDPKEVK 188
            V+G V D E+G PL G SV++K   KG  T +DG +++  V    +L+  Y+G+  KE+ 
Sbjct: 36   VTGVVKDGESGDPLVGVSVLVKGTSKGVVTDLDGAYSIQDVSTEDVLMFSYLGYSMKEIP 95

Query: 189  -AARELGTIKLNLATSELDAVQIQAYTTTSKRLSLSNSVSVRAKEIEDQIVSNPLLALQG 247
              +R +  ++L   TS+LD V I  Y    KR       SV ++E+    V +P+  LQG
Sbjct: 96   IGSRSVIDVELVSNTSDLDEVVIVGYGVQEKRNLTGAIASVGSEEVRKTNVQDPISLLQG 155

Query: 248  KVAGIQIQQVSGNAGATINVKIQGVSSFRGNSSPFFVVDGVPYSSTTMVGTGNINLWGEA 307
            + AG+Q+   SG  G  + + I+G SS    ++P +VVDGVP  +     T ++N     
Sbjct: 156  RAAGVQVTSNSGAPGGGMTINIRGNSSLNAGNNPLYVVDGVPIETNV---TSSLN----- 207

Query: 308  TPTALGVAGNNAGISYGSGNPLSFLNPDDIESIDVLKDADATAIYGSRAANGAIVITTKR 367
                      N G+     NPL+ +NP DIESI++LKDA +TAIYGSRAANG ++ITTKR
Sbjct: 208  -------GSENFGL-----NPLAAINPADIESIEILKDASSTAIYGSRAANGVVLITTKR 255

Query: 368  GKPGTLQIDFSSRNGWNQATFGADFLNTEQYLGIRNEAYRNSN-------AVISATNYDL 420
            GK G  QI+ +  +G +Q T   D LN  QY     ++Y NS+       AV+ + +   
Sbjct: 256  GKDGKAQINLNVHSGVSQITRKLDVLNASQYRSAVLDSYANSDDGREPIFAVVDSLSSTN 315

Query: 421  NGIWDKEKFTDWQKELIKTTGYDDASLSVSGGTLNSSYRLNLTGNRQNSAYAR-NFRNDN 479
            NG        DWQ+EL++        LSV GG+ N  Y  + +   Q+      N+R   
Sbjct: 316  NG------DVDWQRELLRKAVQTSVDLSVQGGSENVRYAWSSSFLDQDGIVLNSNYRRIT 369

Query: 480  IALSISLNTASANQKFKLGIVGNYLNGFNNLPSLNQTTAGSFL----YLLPPNAPNLYNT 535
              L++  N      +  +G   +Y NG NN   +N    G+       L+ P + ++Y  
Sbjct: 370  SRLNVDFN---VTDRLTVGQSISYSNGVNN--RINAAGTGNLSIIRELLIRPPSYSMYLP 424

Query: 536  DGTLNWDMDPTGTISRFRNPLSTYLTNPFEVKTNNFTSNITASYNIVNGLDFKTSFGYNR 595
            DG+LN      G     RNP+     +    K+N   +     Y +  GL F+TS   + 
Sbjct: 425  DGSLN------GYQFGKRNPVGLAELSTNLNKSNRIIAGQYLEYKLAEGLKFRTSVNVDF 478

Query: 596  LDQQEFTSNLAESVAPTARNTFIRSGSYRFTNTNNYIIEPQILYNHQFSG-HKLNFLLGA 654
            L  +E T   +        NT    GS R TN   +  E  + Y  Q  G H L  LLG 
Sbjct: 479  LSMKEDTFIPSTLDYREGYNT----GSVRSTNNLTWSNENILTYQKQVDGKHNLGGLLGF 534

Query: 655  TYNKSQGETSGITGSGQSSDSQVKNLSASSSFNQTGSSFYEYRYNAGFFRLDYNFKERYL 714
            +Y     E +G+ G    SD       A +  NQ  +    +   + F R+ Y+++ RYL
Sbjct: 535  SYQDWDYERTGLDGMFFPSDDIRTLNGAGTISNQEVNIATSHSLLSYFGRVSYDYERRYL 594

Query: 715  LGLSARRDGSTRFGPDNRFANFWSAAVGWIVSEETLVKEKLPWLNFFKLRANYGLTGSDG 774
               + R DGS+RFG DNRF  F SA+VGW  S+E  +      L+  KLR + G TG++ 
Sbjct: 595  FEANLRADGSSRFGRDNRFGFFPSASVGWRFSDEPFL-NGAGVLDDGKLRFSAGQTGNEA 653

Query: 775  VGDYTFMDLYSANTFYLPYQNVVGFAPGRLLNSKLQWEEKRSLNIGFDANLLNNRVTLGI 834
            +G+YT    +     YL Y    G AP  + NS L WE     N G D      R+ L +
Sbjct: 654  IGNYTSQGEFMVGANYLDYS---GAAPTVMPNSGLSWETTTQYNAGMDLAFWQGRLGLTV 710

Query: 835  NYNRNRSSNLLQSLNLPVTAGFASVDVNFDALVQNTGWEYTIGVKLLAAKAFKWNVNANL 894
            +     + +LL ++ +P   GF  +  N    ++N G E  +    +A + F W+ + N+
Sbjct: 711  DAYIKDTKDLLYNVPIPRETGFGYITQNI-GKIRNKGIEVLLNTHNVATRHFTWSTSLNI 769

Query: 895  TVPTNKLLSLPSLDKVNR-VAGFGYHI---GLPLGTTTMNTYMGV--------NPLT--- 939
            +  TN +  LP     N  +    +HI   G P+GT     + GV        N +T   
Sbjct: 770  SKNTNIVKELPEELLTNGFIQNGNFHILQEGYPIGTFYGWRFDGVYARDEDNINGVTNGS 829

Query: 940  -------GLEVLEDINGNPVATAGSTANMKTTLRNLYTSPFYAGLQSSFEYKGLSMNLSF 992
                   G  +  D+NG+ V       N +  + N  T  F+ G+ +   YK  S++  F
Sbjct: 830  QGPVFEGGDPIWHDLNGDNVI----DQNDRQVIGNA-TPDFFGGITNDLSYKNFSLSFMF 884

Query: 993  DFNKQLKPRYFFVSSRPGRDAYNQPEIAYSLNRWENPGDIAVIQK--YSTLLGSGLLTQT 1050
             F+   +        R     YN    A +L+RW   GDI    K      L S    Q+
Sbjct: 885  QFSYGGEIYSEINHQRNSIVRYNNLSTA-ALDRWREQGDITDFPKPVQDDPLQSDSRIQS 943

Query: 1051 EAFYEDATYLRLTNIAISWNLPKSWTGIIGMKSSRIGINAQNLFTLSKYSGPDP 1104
              + ED +Y++L N+ + ++LP      IG+      +   NL T + Y+G DP
Sbjct: 944  R-WVEDGSYIKLKNVNLRYSLPLELVNRIGLSRLDAYVTGTNLVTWTNYTGFDP 996