Pairwise Alignments

Query, 1126 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

Subject, 1129 a.a., TonB-linked outer membrane protein, SusC/RagA family from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  342 bits (876), Expect = 1e-97
 Identities = 335/1176 (28%), Positives = 551/1176 (46%), Gaps = 142/1176 (12%)

Query: 25   LTTTILISALLQVSAAGMAQHLT--LNKKNVSLAQVFKEIRKQTGYSILWESEKFDANGK 82
            LT  +L  A ++VSA   +Q LT  LN +N S   + KEI+K++ Y +L+ S+ F+    
Sbjct: 22   LTMLLLAVASMEVSANVFSQTLTMDLNVQNESFESILKEIKKKSKYKVLYPSDLFEGLPN 81

Query: 83   VSVEFKNSSLKEVLNFIINSDKYSYLIDEKTIVIQ------PKDKYEL-NDQIVVSGKVV 135
            +S+  +N++L  + N +I    YSY++ +KTIV +      PK+ ++   D I V G+V 
Sbjct: 82   MSINVQNATLNTIFNKLIVPYGYSYVLRDKTIVFKKEGEAPPKETFQTAKDPIQVKGRVT 141

Query: 136  DENGSPLSGASVVLKANGKGTSTTVDGTFTMSGVDDGAILVIKYIGFDPKEVKAA-RELG 194
            DENG  L GA+V++K   KGT T V+G +++S V   AIL I ++GF  K+V  A +E  
Sbjct: 142  DENGEGLPGANVLIKGTSKGTVTDVNGDYSLS-VPSDAILEISFLGFVSKQVNVAGQEEI 200

Query: 195  TIKLNLATSELDAVQIQAYTTTSKRLSLSNSVSVRAKEIEDQIV-SNPLLALQGKVAGIQ 253
             I L      LD V +  Y +  K+  L+ +VS    E  D+I  ++PL A+QG+ AG+ 
Sbjct: 201  NITLLPDVEALDEVVVIGYGSV-KKSDLTGAVSTVDTENFDKIAGTSPLNAIQGRAAGVS 259

Query: 254  IQQVSGNAGATINVKIQGVSSFR-GN---SSPFFVVDGVPYSSTTMVGTGNINLWGEATP 309
            I   SG  G+  NV ++G+ S   GN   SSP +VVDGV                     
Sbjct: 260  ISSGSGLPGSGFNVTVRGIGSINTGNGSGSSPIYVVDGV--------------------- 298

Query: 310  TALGVAGNNAGISYGSGNPLSFLNPDDIESIDVLKDADATAIYGSRAANGAIVITTKRGK 369
                             N +  +N ++IESI VLKDA A+AIYG+RAANG I++TTKRG+
Sbjct: 299  ---------------ITNSIENINQNNIESISVLKDASASAIYGARAANGVILVTTKRGR 343

Query: 370  PGT-LQIDFSSRNG-WNQATFGADFLNTEQYLGIRNEAYRNSNAVISATNYDLNGIWDKE 427
                 QI F++  G  N++    + LN +Q+L +  E+Y NSN  +     DL   + + 
Sbjct: 344  VNVEPQITFNAYWGVSNESNLKHELLNADQFLELWTESYENSNIPLDWEQSDL--AYYEG 401

Query: 428  KFTDWQKELIKTTGYDDASLSVSGGTLNSSYRLNLTGNRQNSAYARNFRNDNIALSISLN 487
              T+W+  +++  G     +SV+GG+  S+Y ++     Q+       +      +  +N
Sbjct: 402  VDTNWKDLMLQQGGIQSYDVSVAGGSERSNYFVSANLVDQDGMVIGTGQK---KYTFRIN 458

Query: 488  T-ASANQKFKLGIVGNYLNGFNNLPSLNQTTAGSFLYLLPPNAPNLYNTDGTLNWD-MDP 545
            T       FK    GN LN  +N    +QT     L       P   N +   +W  +  
Sbjct: 459  TDHKIRDWFKF---GNSLNISSNKVLGDQTYYRKAL----TKVPLTRNKEEDGDWGIIHN 511

Query: 546  TGTISRFRNPLSTYLTNPFEVKTNNFTSNITASYNIVNGLDF--KTSFGYNRLDQQEFTS 603
             G    F NP+     +  E        N+  + + V  L+F  + S  Y+   Q +F  
Sbjct: 512  PGLEHFFANPIWEAQNSSQEAIWKGLQGNLYITVSPVKNLEFTVRGSLNYSGKKQSDFVP 571

Query: 604  NLAESV--APTARNTFIRSGSYRFTNTNNYIIEPQILYNHQFSGHKLNFLLGATYNKSQG 661
             +        T  NT  +        +N+Y+++    Y      H  NFLLG +  ++  
Sbjct: 572  GVPPEYGWGGTNVNTVYKESYENVYWSNDYLLK----YKLDVKDHAFNFLLGYSREENSA 627

Query: 662  ETSGITGSGQSSDSQVKNLSASSSFNQTGSSFY-EYRYNAGFFRLDYNFKERYLLGLSAR 720
            ET     +G + ++ ++ L A    +Q  S+F+ ++   + F RL+Y+FK++YL   + R
Sbjct: 628  ETLSAQRTG-TINNDIRYLDAGDPTSQINSNFFRDWALVSMFGRLNYSFKDKYLFTGTIR 686

Query: 721  RDGSTRFGPDNRFANFWSAAVGWIVSEETLVKEKLPWLNFFKLRANYGLTGS-DGVGDYT 779
            RDG++R   DNR+  F S ++ W +SEE  + E    L   KLRA+YG  G+ + +G Y 
Sbjct: 687  RDGTSRLTEDNRWGVFPSGSIAWKISEEAFL-ENSAVLEELKLRASYGSLGNVNSIGIYG 745

Query: 780  FMDLYSANTFYLPYQNVVGFAPGRLLNSKLQWEEKRSLNIGFDANLLNNRVTLGINYNRN 839
                 ++       Q  +G+     +N  + WE     N+G DA+++N R    I+Y   
Sbjct: 746  TSATLTSERAVSNNQPALGYTMTSAVNRDVTWESANKANLGIDASVINGRFYGSIDYFIE 805

Query: 840  RSSNLLQSLNLPVTAGFASVDVNFDALVQNTGWEYTIGVKLLAAKAFKWNVNANLTVPTN 899
             + ++L +  +P ++G +   V     V+N G+E  +G +   +  F ++V+ NL+   N
Sbjct: 806  NTFDMLFAEPIPRSSGLSGFPVINGGNVRNKGFEVVLGARGGNSDWF-YDVSFNLSKIKN 864

Query: 900  KLLSLPSLDKVNRVAG---------------FGYHI-GLPLGTTTMNTYMGVNPLT---G 940
            ++  L   +++N  +                FGY   GL    + ++ Y G +  T   G
Sbjct: 865  EVTDLAGREEINLGSSRISYKHKVGAPAHSFFGYKSDGLIREESELDKYAGGSFPTKKVG 924

Query: 941  LEVLEDIN-----GNPVATAGSTANM--KTTLRNLYTSPFYAGLQSSFEYKGLSMNLSFD 993
               L DIN     GN         N   +T + + Y   FY G+ S   YK LS+++   
Sbjct: 925  DIALMDINGYDAEGNLTGEPDGVVNEADRTIIGSRYPEFFYGGVISG-GYKNLSLSIQLQ 983

Query: 994  FNKQLKPRYFFVSSRPGRD--------AYNQPEIAYSLNRW---ENP-GDIAVIQKYSTL 1041
                    YF     PG+         ++ Q E     +R+   +NP G   ++ K    
Sbjct: 984  -GSHGSDEYF----GPGQSTDLFQLMTSFAQNEDVRLYDRYHPTKNPDGTFPLLNKN--- 1035

Query: 1042 LGSGLLTQTEAFY-EDATYLRLTNIAISWNLPKSWTGIIGMKSSRIGINAQNLFTLSKYS 1100
             GSG   Q   F+ E+A+YLR+ NI +S++LP +      + +  +  + QN  T +K  
Sbjct: 1036 -GSGGNEQFSDFWLENASYLRIQNITLSYDLPAALISKAQIDNLGVYFSVQNAHTFTKNH 1094

Query: 1101 GPD----PITGPSGV------MPPMRVIVLNVRASF 1126
             P+      TG SG+      +P  R + L ++A+F
Sbjct: 1095 NPEVGNATATG-SGLNAFVTGVPIPRTLTLGIKAAF 1129