Pairwise Alignments

Query, 1126 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

Subject, 1123 a.a., TonB-linked outer membrane protein, SusC/RagA family from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  306 bits (783), Expect = 8e-87
 Identities = 310/1128 (27%), Positives = 504/1128 (44%), Gaps = 152/1128 (13%)

Query: 46   LTLNKKNVSLAQVFKEIRKQTGYSILWESEKFDANGKVSVEFKNSSLKEVLNFIINSDKY 105
            +TL+ ++  + +V   I ++T +   ++ ++   +  VS+E K  SL  VL  I +  + 
Sbjct: 45   VTLSIEDEPVEKVLYVIEQKTEFRFAYDLDQVRNSAMVSIEAKEQSLLSVLEAISSKTQL 104

Query: 106  SYLIDEKTIVIQ---PKDKYELN----DQIVVSGKVVDENGSPLSGASVVLKAN-GKGTS 157
             +     TI +    P  K ++     + + V+GKV+D+ G+PL GASVV++    +GT 
Sbjct: 105  KFKQINNTIHVSKAAPTTKSKVGPVQLEIVEVTGKVLDDTGAPLPGASVVVEGEPSRGTV 164

Query: 158  TTVDGTFTMSGVDDGAILVIKYIGFDPKEVKAARELG-TIKLNLATSELDAVQIQAYTTT 216
            T +DG +T+    +GA LV  YIGF+ K+V    +    + L ++TS L+ V +  Y T 
Sbjct: 165  TDMDGNYTIDA-PEGATLVFSYIGFESKKVVVGSQSSINVTLAMSTSSLEEVVVVGYGT- 222

Query: 217  SKRLSLSNSVS-VRAKEIEDQIVSNPLLALQGKVAGIQIQQVSGNAGATINVKIQGVSSF 275
             K+LS++ +V  V  +++E + V+    ALQG  A + +QQ +   GA IN+ I+G+S+ 
Sbjct: 223  QKKLSVTGAVDQVGQEKLEGRPVATMSQALQGVSANLIVQQRNSEPGAGINLNIRGISTL 282

Query: 276  RGNSSPFFVVDGVPYSSTTMVGTGNINLWGEATPTALGVAGNNAGISYGSGNPLSFLNPD 335
             G++SP  V+DGV       +G G+INL                            LNP 
Sbjct: 283  -GDNSPLIVIDGV-------IG-GDINL----------------------------LNPS 305

Query: 336  DIESIDVLKDADATAIYGSRAANGAIVITTKRGKPGTL-QIDFSSRNGWNQATFGADFLN 394
            DIES+ VLKDA + AIYGSRA NG ++ITTK+GK  T  ++ ++   G N   F    ++
Sbjct: 306  DIESVSVLKDAGSAAIYGSRANNGVVLITTKQGKKNTRPKVTYNGLVGVNTPQFFTQPVH 365

Query: 395  TEQYLGIRNEAYRN---SNAVISATNYDLNGIWDKEKFTDWQKELIKTTGYDDASLSVSG 451
              Q   +RNE+  N   S AV S    ++  I +      + KE+ K     + +LSVSG
Sbjct: 366  GYQNAMLRNESAFNAGRSEAVFSPE--EIRQIRENGDTEWFAKEIFKNALQQNHNLSVSG 423

Query: 452  GTLNSSYRLN--LTGNRQN-----SAYAR-NFRNDNIALSISLNTASANQKFKLGIVGNY 503
            G+ NS+Y ++   T  R N       Y R NFR         +N  +   +FK+     Y
Sbjct: 424  GSENSTYLVSAGYTDQRSNFVGPEKGYTRYNFR---------MNLTNEFGRFKMSSRLAY 474

Query: 504  LNGFNNLPSLNQTTAGSFLYLLPPNAPNLYNTDGTLNWDMDPTGTISRFRNPLSTYLTNP 563
                    S +  T    L       P  Y    +L   +  T  I +  NPL       
Sbjct: 475  TRRLIKDHSFSSGT----LMADANRVPLYYTQKDSLGRYL--TNDILQQFNPLGILEKGG 528

Query: 564  FEVKT-NNFTSNITASYNIVNGLDFKTSFGYNRLDQQEFTSNLAESVAPTARNTFIRSGS 622
            F   T +N   N++    + + L  +  FG+N      +   L     P  R  +    +
Sbjct: 529  FREHTDDNVFGNLSGELKLTDDLTMRGVFGFNMYSNNMYARTLQVDFYP--RGIYGGDRN 586

Query: 623  YRFTNTNNYIIEPQIL--YNHQFSG-HKLNFLLGATYNKSQGETSGI---TGSGQSSDSQ 676
             R  N     +  Q++  YN  FS  H++N L+G +         GI       +     
Sbjct: 587  TRDENRKGLDLNSQLMLQYNKVFSDRHEINALVGVSNENHTDRGVGIYKRLTDPELGTPI 646

Query: 677  VKNLSASSSFNQTGSSFYEYRYNAGFFRLDYNFKERYLLGLSARRDGSTRFGPDNRFANF 736
             + +    S+N   SS  E   N+ F R+ Y+  ++Y    S R DGS++F  D R+  F
Sbjct: 647  TETIINPDSYNSNQSS-SENSLNSLFGRVSYDLDKKYFAEFSFRYDGSSKFREDIRWGFF 705

Query: 737  WSAAVGWIVSEETLVKEKLPWLNFFKLRANYGLTGSDGVGDYTFMDLYSANTFYLPYQNV 796
             SA++G+ +SEE  ++         K+R++YG+ G+  VG+Y +       T +  +QN 
Sbjct: 706  PSASIGYRISEEDFMRNYRDRFGEVKIRSSYGVLGNQNVGNYQY------QTTFFTFQNA 759

Query: 797  VGF---APG----RLLNSKLQWEEKRSLNIGFDANLLNNRVTLGINYNRNRSSNLLQSLN 849
             GF   A G       N  +QWE   + NIG D + L+  +TL ++Y    +S++L    
Sbjct: 760  YGFNNDAVGGTGFNYANPNIQWERAATFNIGADLDFLDGALTLSLDYFDKVTSDILVPPA 819

Query: 850  LPVTAGFASVDVNFDALVQNTGWEYTIGVKLLAAKAFKWNVNANLTVPTNKLLS------ 903
            +P   G +  D N +  V N GWE T   +    + F+   + NL    NK+L       
Sbjct: 820  VPGVFGTSLPDFN-NGKVGNKGWEVTTTYR-HRGELFEHTFSFNLADSKNKVLDFQGEER 877

Query: 904  LPSLDKVNRVAGFGYHIGLPLGTTTMNTYM------------GVNPLTGLEVLEDINGNP 951
            L  ++++  +   GY     +G      +             G+N   G     D++GN 
Sbjct: 878  LTGVEELQVLLKEGYPFNSYVGLKRDGYFQTIVEAENGPKPEGLNVQPGDNRYVDVDGNG 937

Query: 952  VATAGSTANMKTTLRNLYTSPF---YAGLQSSFEYKGLSMNLSFDFNKQLKPRYFFVSS- 1007
            +        +    + ++ +PF     GL  +   KG  +N+   F + +  R   +   
Sbjct: 938  I--------INDEDKYVFGNPFPRMTFGLTYNVRVKGFDLNV---FAQGVGSRTMMIRGE 986

Query: 1008 --RPGRDAYNQPEIAYSLNRW--ENPGDIAVIQKYSTLLGSGLLTQTEAFYE-------D 1056
               P    Y      + L+ W  +NP       ++  L  +G  + T  F         D
Sbjct: 987  MVEPFHYNYGMTMYEHQLDYWTPQNPD-----ARFPRLADNGSQSNTNNFRRGSDMYLFD 1041

Query: 1057 ATYLRLTNIAISWNLPKSWTGIIGMKSSRIGINAQNLFTLSKYSGPDP 1104
            A YLRL N+ + + LPKS    +GM++ R  ++ QNLFTLSK    DP
Sbjct: 1042 AAYLRLKNVQVGYTLPKSLADKLGMQNCRAYLSGQNLFTLSKVDFVDP 1089