Pairwise Alignments

Query, 1126 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

Subject, 1155 a.a., TonB-linked outer membrane protein, SusC/RagA family from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  318 bits (816), Expect = 1e-90
 Identities = 301/1193 (25%), Positives = 533/1193 (44%), Gaps = 151/1193 (12%)

Query: 19   MLMIMKLTTTILISALLQVSAAGMAQHLTLNKKNVSLAQVFKEIRKQTGYSILWESEKFD 78
            +LM++   TT+  + +   SA G  + +TL+ K+  L  V  +I  QT +  ++ +++ +
Sbjct: 29   ILMVLIFLTTL--NPIQAYSAYGQNEKVTLDVKDKPLEAVLYQIESQTSFKFIYSNDELN 86

Query: 79   ANGKVSVEFKNSSLKEVLNFIINSDKYSY-LIDEKTIVIQPKDKYELNDQIV-----VSG 132
            A   +++  ++  L+EVLN + N  K  Y +I +  IV++ K   + N+ +V     ++G
Sbjct: 87   AAETITLSVQDKPLEEVLNVLFNPRKIEYQIIMDTQIVLKKKADNDPNESLVLQAVTITG 146

Query: 133  KVVDENGSPLSGASVVLKANGKGTSTTVDGTFTMSGVDDGAILVIKYIGFDPKEVKAARE 192
             V D+NG+PL GAS++ K    GT   +DG FT+      A+L I Y+GF  +E      
Sbjct: 147  TVTDKNGAPLPGASILEKGTNNGTVADIDGHFTLEVSAADAVLKISYLGFIAQEYPLN-- 204

Query: 193  LGTIKLNLATSE----LDAVQIQAYTTTSKRLSLSNSVS-VRAKEIEDQIVSNPLLALQG 247
             G   +N+   E    LD V +  Y +  KR +++ +V+ V+   +E +++S+    LQG
Sbjct: 205  -GKTTINITLEEDVTGLDEVIVVGYGS-QKRSNITGAVAEVKGDVLEGRVISSVAGGLQG 262

Query: 248  KVAGIQIQQVSGNAGA-TINVKIQGVSSFRGNSSPFFVVDGVPYSSTTMVGTGNINLWGE 306
             + G+ +   SG  GA   N+ I+GV++    +SP  ++DGV                  
Sbjct: 263  LIPGLTVTSPSGQPGAGASNMLIRGVNTINSQTSPLILIDGV------------------ 304

Query: 307  ATPTALGVAGNNAGISYGSGNPLSFLNPDDIESIDVLKDADATAIYGSRAANGAIVITTK 366
                              +G  ++ LNPDDIES+ VLKDA ++AIYG+RAANG I++TTK
Sbjct: 305  ------------------AGGDINLLNPDDIESVTVLKDAASSAIYGARAANGVILVTTK 346

Query: 367  R-GKPGTLQIDFSSRNGWNQATFGADFLNTEQYLGIRNEAYRNSNAVI-----SATNYDL 420
            + G    + +++S+  G        + +N  +Y+ + NEA R     +     +   YD 
Sbjct: 347  KGGGEEKVSLNYSNYFGIQTPIATPELVNGREYMTLENEARRARGVAVPYADEAFERYDS 406

Query: 421  NGIWDKEKFTDWQKELIKT-TGYDDASLSVSGGTLNSSYRLNL-----TGNRQNSAYARN 474
                +    TDW  E  K+ +   + + +V G T NSSY L+      TG      Y  +
Sbjct: 407  GNFPNDYSNTDWVSETYKSHSSQQNHNFNVQGQTDNSSYYLSYGYLEQTGLVVGDPYFSS 466

Query: 475  FRNDNIALSISLNTASANQKFKLGIVGNYLNGFNNLPSLNQTTAGSF--LYLLPPNAPNL 532
              N  + L           +  L    +Y++ F    +    T+G F     + P  P +
Sbjct: 467  RNNVRLRLG-----TKVLDRLTLDANISYVD-FYKRDAGGAGTSGVFRLSQRISPLLPVM 520

Query: 533  Y---NTDGTLNWDMDPTGTISRFRNPLSTYLTNPF-EVKTNNFTSNITASYNIVNGLDFK 588
            +     DG   W+  P  +     NP+ T   + + + K+     N  A+ ++++G+   
Sbjct: 521  WQQPTADG--GWEDSPYWSYGSVTNPVRTAHESGYTKSKSRTLNGNFKATLDLIDGMYIN 578

Query: 589  TSFGYN--RLDQQEFTSNLAESVA---PTARNTFIRSG--SYRFTNTNNYIIEPQILYNH 641
              + YN    D +++T+ +   +A   P   N  IR+G  +  +T     ++     Y+ 
Sbjct: 579  AQYAYNYYNRDIKDWTATMPRFLADGTPHPANENIRNGIANSHYTTLTQTLLS-TFNYDK 637

Query: 642  QFSGHKLNFLLGATYNKSQGETSGITGSGQS-SDSQVKNLSASSSFNQTGSSFYEYRYNA 700
                H L FL G  Y++       +  S ++     +  + A +     G +  E+   +
Sbjct: 638  VIGRHGLKFLAG--YSQEWSSMPRLYASRRNILMDGITEIDAGTEDIVNGGTSEEWALRS 695

Query: 701  GFFRLDYNFKERYLLGLSARRDGSTRFGPDNRFANFWSAAVGWIVSEETLVKEKLPWLNF 760
             F R++Y+F ++YL   + R DG++RF  DNR+  F S + GW  +EE  +    P+LN 
Sbjct: 696  YFGRINYDFDQKYLFEANLRVDGTSRFSKDNRWGVFPSFSAGWKFTEEAFMDFAKPFLNV 755

Query: 761  FKLRANYGLTGSDGVGD--YTFMDLYSANTFYLPY--QNVVGFAPGRLLNSKLQWEEKRS 816
             K+RA++G  G+  +    Y ++      T   P   +  VGF    L N  +QWE  + 
Sbjct: 756  GKIRASWGELGNQNISGNYYPYLTEIERQTKAYPIGAKENVGFRQYSLANENIQWETIQM 815

Query: 817  LNIGFDANLLNNRVTLGINYNRNRSSNLLQSLNLPVTAGFAS---VDVNFDALVQNTGWE 873
            LNIG D ++L +R+TL +++ + ++ N L     P   G  S   + +     ++N GWE
Sbjct: 816  LNIGADFSMLKDRMTLSVDWFKKKNINALLKPIYPSLIGITSSSNLPLENIGAIENKGWE 875

Query: 874  YTIGVKLLAAKAFKWNVNANLTVPTNKLLSLPSL-----DKVNRV-----AGFGYHIGLP 923
              +G      + F++++NAN+    NK+  + S      D + RV     A +GY   L 
Sbjct: 876  IALGWSDQVGE-FRYSINANIADAKNKITDMGSSAASLGDNIRRVGDPVNAYYGY---LT 931

Query: 924  LGTTTMNTYMGVNPLTGL--------------------EVLEDINGNPVATAGSTANM-K 962
             G   ++ +   +  TG                      +  DI+G      G      K
Sbjct: 932  NGLAQIDDFEAFDESTGRYTNPTFPVISSYADIIQPGDVIYRDISGEAGQPDGLIDEYDK 991

Query: 963  TTLRNLYTSPFYAGLQSSFEYKGLSMNLSFD----FNKQLK--PRYFFVSSRPGRDAYNQ 1016
                + Y    Y G++    +KG  ++         N  L+   R+ F++       Y+ 
Sbjct: 992  VVFGDPYPRYSY-GIRGFAAWKGFDLSFFLQGVGKVNGYLRDEARHAFIND------YSV 1044

Query: 1017 PEIAYSLNRWENPGDIAVIQKYSTLLGSGLLTQTEAFYEDATYLRLTNIAISWNLPKSWT 1076
            P+  + ++RW      A   +        +L  +  + EDA+YLRL N+ I ++LP+   
Sbjct: 1045 PKKVH-MDRWTPENTDASYPRMYYQPDHNILF-SNYWLEDASYLRLKNLQIGYSLPQQLI 1102

Query: 1077 GIIGMKSSRIGINAQNLFTLSKYSG---PDPITGPSGVMPPMRVIVLNVRASF 1126
              I +   R+    +NLFT++ Y G   P+         P +R + L V+  F
Sbjct: 1103 ERIKLSRCRVYFTGENLFTITDYFGGFDPEVRETSGDAYPQVRTMALGVQLGF 1155