Pairwise Alignments

Query, 1126 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

Subject, 1116 a.a., TonB-linked outer membrane protein, SusC/RagA family from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  383 bits (983), Expect = e-110
 Identities = 320/1160 (27%), Positives = 539/1160 (46%), Gaps = 117/1160 (10%)

Query: 20   LMIMKLTTTILISALLQVSAAGMAQHLTLNKKNVSLAQVFKEIRKQTGYSILWESEKFDA 79
            L++MK T  + +S + QV+A   +Q LTL  K + L +V + I  Q+ Y  ++  E    
Sbjct: 21   LLVMKWTLILCLSLVFQVTAKVHSQELTLKAKGLPLKEVMEMIESQSKYRFVFNDETVSQ 80

Query: 80   NGKVSVEFKNSSLKEVLNFIINSDKYSYLIDEKTIVIQPKDKYELNDQIVVSGKVVDENG 139
            +  V V+ ++ SLK  L+ + ++  ++Y + +  IVI+PK        I ++G V+ E+G
Sbjct: 81   SKPVFVDVESGSLKSTLSEVFSNQPFTYELVDTYIVIKPKAGIPAAI-IEITGTVLGEDG 139

Query: 140  SPLSGASVVLKANGKGTSTTVDGTFTMSGVDDGAILVIKYIGFDPKEVKA-ARELGTIKL 198
             PL GA+V +K + +GT T +DGTF  SG+++ A+LV+ +IG+DP+E+   +R    + L
Sbjct: 140  EPLPGATVRVKGSSRGTVTDLDGTFAFSGLEEDAVLVVSFIGYDPQEIPVNSRSKIEVIL 199

Query: 199  NLATSELDAVQIQAYTTTSKRLSLSNSVSVRAKEIEDQIVSNPLLALQGKVAGIQIQQVS 258
              + ++L  + +  Y    ++   S   + R  E   + V  P   +QG++ G+ +   +
Sbjct: 200  KPSQNDLSEIVVIGYGQQDRKEVTSAISNFRPDEKNFRQVLGPDQLMQGRMPGVHVGAGA 259

Query: 259  GNAGATINVKIQGVSSFRGNSSPFFVVDGVPYSSTTMVGTGNINLWGEATPTALGVAGNN 318
            G  G+ + V I+G+ S  G + P +VVDG+P                        V  N 
Sbjct: 260  GTPGSNVRVSIRGIGSLSGQNEPLYVVDGIPL-----------------------VNHNA 296

Query: 319  AGISYGSG-NPLSFLNPDDIESIDVLKDADATAIYGSRAANGAIVITTKRGKPGTLQIDF 377
            A  + G G NPLS LNP+DIESI+VLKDA + AIYGSRA NG ++ITTK GK G   ++ 
Sbjct: 297  ALFNLGEGMNPLSELNPNDIESIEVLKDAASAAIYGSRATNGVVIITTKSGKAGQSSLNI 356

Query: 378  SSRNGWNQATFGADFL---------NTEQYLGIRNEAYRNSNAVISATNYDLNGIWDKEK 428
                   +  FG  +L         +++ YL + NEA  N N     +  D N +   E 
Sbjct: 357  -------ETNFGIQYLPNLDKLKMADSDLYLEVLNEARYNYNQQNGYSPGDGNFVDYMED 409

Query: 429  ------FTDWQKELIKTTGYDDASLSVSGGTLNSSYRLNLTG---NRQNSAYARNFRNDN 479
                   T+W   +++     + ++S S GT     +L ++G   N++      +++  N
Sbjct: 410  PYPGLPDTNWLDLVLRDALVSNVNVSFSTGT--DKTKLYISGGYLNQEGVIKTNDYKKYN 467

Query: 480  IALSISLNTASANQKFKLGIVGNYLNGFNNLPSLNQTTAGSFLYLLPPNAPNLYNTDGTL 539
              +++   T  A    ++G   N    F+    +   T GS ++L        ++     
Sbjct: 468  AKINV---THQAVNWLEIGTNTNL--SFSRNHRIPNGTYGSSIFLRSMGQ-RPFDRPYKP 521

Query: 540  NWDMDPTGTISR-FRNPLSTYLTNPFEVKTNNFT--SNITASYNIVNGLDFKTSFGYNRL 596
            N D    GT    + N L   + N    K +N+    N+ A          K SFG + +
Sbjct: 522  NGDYYVGGTEELVYHNNLQ--ILNEQNTKLDNYRMLGNVYADIKFSPSFHLKNSFGMDAI 579

Query: 597  DQQEFTSNLAESVAPTARNTFIRSGSYRFTNTNNYIIEPQILYNHQFSGHKLNFLLGATY 656
              +++     E      +   +     R   TN  +IE  + ++H F    +N L+G +Y
Sbjct: 580  YTEDYLYYTDEHPYGAGQGRLLDE---RRMMTNG-LIENTLYFDHTFGKLSVNALVGHSY 635

Query: 657  NKSQGETSGITGSGQSSDSQVKNLSASSSFNQTGSSFYEYRYNAGFFRLDYNFKERYLLG 716
             K    T+ I G G  S S    LS +S      S F E    + + R + +++++YLL 
Sbjct: 636  QKVTTSTNYIDGRGFPSPS-FDVLSVASEIANASSGFGENALESYYSRANLSWEDKYLLS 694

Query: 717  LSARRDGSTRFGPDNRFANFWSAAVGWIVSEETLVKEKLPWLNFFKLRANYGLTGS-DGV 775
            LS R DGS++F P+ R+ +F S + GW +S+E   K     L   KLRA+YG TG+ DG+
Sbjct: 695  LSIRADGSSKFSPEKRYGSFPSISAGWNLSDENFWKFSQTDL---KLRASYGATGNQDGI 751

Query: 776  GDYTFMDLYSANTFYLPYQNVVGFAPGRLLNSKLQWEEKRSLNIGFDANLLNNRVTLGIN 835
            G Y +  L S       Y    G +     N  L WE     ++G D  L + +     +
Sbjct: 752  GSYAYQALMSGGA---NYAGNSGLSISTFGNPNLTWETANQFDVGIDLGLWSGKANFSAD 808

Query: 836  YNRNRSSNLLQSLNLPVTAGFASVDVNFDALVQNTGWEYTIGVKLLAAKAFKWNVNANLT 895
            Y    + NLL ++ +  T+GF+SV  N  ++ +NTG E+ +       +  +W  + N++
Sbjct: 809  YFIKNTENLLYNMPIHATSGFSSVTSNIGSM-RNTGLEFLLDYNHRFGE-LQWQSSFNIS 866

Query: 896  VPTNKLLSLPSLDKVNRVAGFGYHIGLPLGTTTMNTYMGV--------NPL------TGL 941
               N+L SL   D +   A     +G  +G+  M   +G+         PL       G 
Sbjct: 867  FIQNELTSLLGDDPLLIGANRTLQVGEEVGSFYMYKMLGIFQTDEEVPEPLYEQGVRAGD 926

Query: 942  EVLEDINGNPVATAGSTANMKTTLRNLYTSPFYAGLQSSFEYKG--LSMNLSFDFNKQLK 999
               ED+NG+ +        + T+        FY G  ++F+YK   LS  L+F    ++ 
Sbjct: 927  VHYEDVNGDGIINVDDRQIIGTS-----NPDFYGGWSNTFQYKNFDLSAFLTFSQGSEIY 981

Query: 1000 PRYFFVSSR--PGRDAYNQPEIAYSLNRWENPGDIAVIQKYSTLLGSGLLT-QTEAFYED 1056
              +   + R   GR  + +     +L RW  PG    + +   + G+G  T  +  F ED
Sbjct: 982  ANWRITTERLGSGRQGFREEP---ALERWTGPGTSNEVPR--AIHGTGYNTYNSSRFLED 1036

Query: 1057 ATYLRLTNIAISWNLPKSWTGIIGMKSSRIGINAQNLFTLSKYSGPDP----------IT 1106
            A++LRL  +++ ++LP+S    + M   RI +  +NL+  S Y+G DP          ++
Sbjct: 1037 ASFLRLRTLSLGYSLPQSLLEKLQMSKLRIFVQGENLYLFSNYTGLDPEVSKNYDARYMS 1096

Query: 1107 GPSGVMPPMRVIVLNVRASF 1126
              +  +P  R I L + ASF
Sbjct: 1097 DDNMNLPQPRTIRLGLNASF 1116