Pairwise Alignments

Query, 1126 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

Subject, 1021 a.a., TonB-linked outer membrane protein, SusC/RagA family from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  316 bits (810), Expect = 5e-90
 Identities = 296/1025 (28%), Positives = 450/1025 (43%), Gaps = 139/1025 (13%)

Query: 129  VVSGKVVD-ENGSPLSGASVVLKANGKGTSTTVDGTFTMSGVDDGAILVIKYIGFDPKEV 187
            V++G VV  E+ SPL G S++LK +G GT T +DG FT+   D+GA+L+   IGF  +EV
Sbjct: 52   VITGTVVSSEDNSPLPGVSILLKGSGTGTVTDIDGKFTLEVPDEGAVLIFSSIGFVKQEV 111

Query: 188  KAARELG-TIKLNLATSELDAVQIQAYTTTSKRLSLSNSVSVRAKEIEDQIVSNPLLALQ 246
                +    I +     +L  V +  Y T  K+       SV  K+    +   P   +Q
Sbjct: 112  SVGDQTNLNITMEADLQQLGEVVVVGYGTQRKKDITGAVASVGEKDFNTGMSVAPEQLMQ 171

Query: 247  GKVAGIQIQQVSGNAGATINVKIQGVSSFRGNSSPFFVVDGVPYSSTTMVGTGNINLWGE 306
            GKVAG+ I Q SG  GA   V+I+GV+S    + P +V+DGVP              +  
Sbjct: 172  GKVAGVNIVQNSGQPGAASTVRIRGVNSISAGNDPLYVIDGVPMQ------------FNS 219

Query: 307  ATPTALGVAGNNAGISYGSGNPLSFLNPDDIESIDVLKDADATAIYGSRAANGAIVITTK 366
            A      + G++   S G+ NPL+ +NP DIESID+LKDA ATAIYGSR ANG I+ITTK
Sbjct: 220  ANNFVSSMQGSSPFSSEGT-NPLNSINPSDIESIDILKDASATAIYGSRGANGVIIITTK 278

Query: 367  RGKPGTLQIDFSSRNGWNQATFGADFLNTEQYLGIRNEAYRNSNAVISATNY----DLNG 422
                                  G + L  + Y+G+ N   R +  V+SA  Y    + NG
Sbjct: 279  NKS-------------------GGETLTYDTYVGVSN--IRKTLPVLSADQYRNYAEENG 317

Query: 423  I--WDKEKFTDWQKELIKTTGYDDASLSVSGGTLNSSYRLNLTGNRQNSAYARNFRNDNI 480
            +   D+   T WQ E+ ++    + +++  GG+  S++R +L    Q            I
Sbjct: 318  LNYPDEGANTFWQDEIFRSAVSQNHNVAFGGGSAASTFRASLGYTDQ----------QGI 367

Query: 481  ALSISLN--TASANQKFKLGIVGNYLNGFNNLPSLNQTTAGSFLYLLPPNAPNLYNTDGT 538
             LS  L   TA  N   K  + G    G N        T G       P + N+ N  G 
Sbjct: 368  LLSSGLKKYTARFNGTHK-ALEGRLRLGIN-------MTYGKTAEDNTPISSNINNEGGN 419

Query: 539  LNWD----------MDPTGT---ISRFR-NPLSTYLTNPFEVKTNNFTSNITASYNIVNG 584
            +  D           +P G+   I   R NP+S ++    E  TN F  N+  +++I++ 
Sbjct: 420  ILKDAIRWAPTLPVTNPDGSYYQIGELRINPVS-WVEVDDERNTNLFLGNVDVAFDIMDE 478

Query: 585  LDFKTSFGYNRLDQQEFTSNLAESVAPTARNTFIRSGSYRFTNTNNYIIEPQILYNHQFS 644
            L F+ + G+N    + FT+    +  P       R+   +  N ++ ++E  + YN    
Sbjct: 479  LTFRMNIGHNDQYVERFTN--MPATHPAGETDGGRASINKLKNYSS-VMEATLTYNKDLG 535

Query: 645  GH-KLNFLLGATYNKSQGETSGITGSGQSSDSQVKNLSASSSFNQTGSSFYEYRYNAGFF 703
             +  LN L G ++ +   E +    +   S S   NL  S +     S     R  + F 
Sbjct: 536  NNTNLNLLGGYSFQRFVTEYTFTEANNFVSSSVKWNLIQSGNILSNTSYKSANRLASVFG 595

Query: 704  RLDYNFKERYLLGLSARRDGSTRFGPDNRFANFWSAAVGWIVSEETLVKEKLPWLNFFKL 763
            R +   K+RYL   + R DGS+RFG +NR+  F S A  W ++EE  +K      +  KL
Sbjct: 596  RANLRLKDRYLFTFTLRNDGSSRFGENNRWGLFPSGAFAWNIAEEGFMKASA--FDQLKL 653

Query: 764  RANYGLTGSDGVGDYTF---MDLYSANTFYLPYQNVVGFAPGRLLNSKLQWEEKRSLNIG 820
            R  YG+TG+  + +  +   + +  +  + L  + +    P    N  LQWE+   LNIG
Sbjct: 654  RMGYGVTGNQEIPNDLYRQQLGIAGSAVYVLGGEAIPSVLPTNYANPDLQWEQTNQLNIG 713

Query: 821  FDANLLNNRVTLGINYNRNRSSNLLQSLNLPVTAGFASVDVNFDAL--VQNTGWEYTIGV 878
             D     NR+T  I+Y    ++NLL   +   TA  + V+  +  +  V+N G E ++  
Sbjct: 714  LDFGFWENRLTGTIDYYEKYTNNLLLQFS---TAAPSVVNTQWANVGEVENKGLEVSLNA 770

Query: 879  KLLAAKAFKWNVNANLTVPTNKLLSLPS------------LDKVNRVAGFGYHI--GLPL 924
             L+  + F WN+N N +   N++ SL +            L  V     F   I  GLPL
Sbjct: 771  DLIIDRPFSWNMNVNFSRNRNEVTSLSNEQFSRDEIRTSPLSGVITPKDFSQIIKPGLPL 830

Query: 925  GTTTMNTYMGVNPLTGLEVLEDINGNPVATAGSTANMKTTLRNLYTSPFYAGLQSSFEYK 984
            GT     + G++   G+E   D +G   A      N            F  G+   F + 
Sbjct: 831  GTFYGRQFTGLDE-NGMETYLDEDGEDGADLVVIGNA--------NPDFIYGMTHRFMWN 881

Query: 985  GLSMNLSFDFNKQLKPRYFFVSSRPGRDAYNQPEIAYSLNRWENPGDIAVIQKYSTLLGS 1044
                +L+             +    G D  N     +S      PG    I    + L S
Sbjct: 882  NFDASLT-------------LRGVVGNDVLNNTAAEFSYTN-STPG----INILESSLSS 923

Query: 1045 GLLTQTEA-----FYEDATYLRLTNIAISWNLPKSWTGIIGMKSSRIGINAQNLFTLSKY 1099
            G+     A     + ED +YLRL NI I +N   S  G   +K +R+ +  QNLF L+ Y
Sbjct: 924  GVSRDQTAQFSSRWLEDGSYLRLDNINIGYNFDVSELGF--LKRARLYVTGQNLFVLTGY 981

Query: 1100 SGPDP 1104
            SG DP
Sbjct: 982  SGYDP 986