Pairwise Alignments

Query, 1126 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

Subject, 1056 a.a., TonB-linked outer membrane protein, SusC/RagA family from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  332 bits (852), Expect = 7e-95
 Identities = 293/1067 (27%), Positives = 479/1067 (44%), Gaps = 135/1067 (12%)

Query: 130  VSGKVVD-ENGSPLSGASVVLKANGKGTSTTVDGTFTMSGVDDGAILVIKYIGFDPKEVK 188
            +SG VV  E+  PL G S++LK  GKGT T +DG FT+   D+GA+L    IGF  +E+ 
Sbjct: 55   ISGTVVSSEDNLPLPGVSILLKGTGKGTVTDIDGNFTLEVPDEGAVLTFSSIGFVTQEIA 114

Query: 189  AARELG-TIKLNLATSELDAVQIQAYTTTSKRLSLSNSVSVRAKEIEDQIVSNPLLALQG 247
               +    + L +   +L  V +  Y T  K         +  + + ++ +     AL G
Sbjct: 115  VGSQTTLNVTLQVDMQQLGEVVVVGYGTQKKANITGAIAQMEPENLTERPIQRVDQALVG 174

Query: 248  KVAGIQIQQVSGNAGATINVKIQGVSSFRGNSSPFFVVDGVPYSSTTMVGTGNINLWGEA 307
            ++AG++++Q +G  G   +++I+GV S   NS P +V+DG P                  
Sbjct: 175  QMAGVRVKQTTGVPGRGFDIQIRGVGSITANSQPLYVIDGFP------------------ 216

Query: 308  TPTALGVAGNNAGISYGSGNPLSFLNPDDIESIDVLKDADATAIYGSRAANGAIVITTKR 367
                L  AG         GNP+  ++P+DIESI VLKDA A AIYGSRAANG ++I TK 
Sbjct: 217  ----LEAAG---------GNPMDNISPNDIESIQVLKDAAAAAIYGSRAANGVVMINTKS 263

Query: 368  GKPGTLQIDFSSRNGWNQATFGADFLNTEQYLG----IRNEAYRNSNAVISAT------- 416
            GK G  QI  +S  G+N+     D L+  +++     + N  +  S    SA+       
Sbjct: 264  GKSGKAQISLNSYIGFNETVKKLDVLSPTEWIDRATEMINTQWEQSGEGRSASQSLAERE 323

Query: 417  --------NYDLNGIWDKEKF-----TDWQKELIKTTGYDDASLSVSGGTLNSSY----- 458
                    NY  +  W  E +      DWQ  L +     +  L+ SGG  N  Y     
Sbjct: 324  AIIGGFDRNYMYDERWTMEGYPGLMLVDWQDHLFRKGLVQNYQLNASGGNENVKYFISGD 383

Query: 459  RLNLTGNRQNSAYARNFRNDNIALSISLNTASANQKFKLGIVGNY--LN--GFNNLPSLN 514
             L+  G      Y R     N+ +      AS   KF L +  +Y  LN  G     ++ 
Sbjct: 384  YLDQEGIAVGLDYKRYSARANVEVQ-----ASNKLKFGLNLNPSYSTLNDPGVEGKDAIT 438

Query: 515  QTTAGSFLYLLPPNAPNLYNTDGTLNWDMD--PTGTISRFRNPLSTYLTNPFEVKTNNFT 572
             TT G         AP +   D  LN  +   P  T +  R     Y  +    +T  F 
Sbjct: 439  HTTVGM--------AP-VVEADAGLNTGVGEIPLYTWASSRLSPIAYAKSRLN-ETTIFR 488

Query: 573  SNITA--SYNIVNGLDFKTSFGYNRLDQQEFTSNLAESVAPTARNTFIRSGSYRFTNTNN 630
            +  TA   Y+ ++GL FKT+   + +DQQ    N   + A   RN    +G +       
Sbjct: 489  NLATAYGQYDFIDGLAFKTTLNVDNVDQQ----NKNYTPAAVTRNN-QTTGGFNGYRKLT 543

Query: 631  YIIEPQILYNHQFS-GHKLNFLLGATYNKSQGETSGITGSGQSSDSQVKNL----SASSS 685
            ++ E  + Y   F+  H LN ++G +YN ++  T  + G+         N     + S++
Sbjct: 544  FVNENTLTYVKSFNEEHNLNAVIGMSYNFNKRNTYTMGGNFDVEGITTLNAAVINAGSTN 603

Query: 686  FNQTGSSFYEYRYNAGFFRLDYNFKERYLLGLSARRDGSTRFGPDNRFANFWSAAVGWIV 745
              +T S+   Y     F R+ Y++K +YL+  SARRDGS+RFG + ++  F S ++GW +
Sbjct: 604  TTETQSTLLSY-----FGRVQYDYKGKYLVSASARRDGSSRFGDETKWGFFPSVSLGWRL 658

Query: 746  SEETLVKEKLPWLNFFKLRANYGLTGSDGVGDYTFMDLYSANTFYLPYQNVVGFAPGRLL 805
            S+E  +++ +P+++  K+R ++GL+G++G+GDY+ +       +        G  PG   
Sbjct: 659  SDEAFMQD-VPFISDLKVRGSWGLSGNNGIGDYSHIATLDFANYSYGGALSNGLIPGNFP 717

Query: 806  NSKLQWEEKRSLNIGFDANLLNNRVTLGINYNRNRSSNLLQSLNLPVTAGFASVDVNFDA 865
            N +L WEE   +N+G D  +L NR  +  +Y   +++NLL ++ +P   GF +   N   
Sbjct: 718  NPELGWEESEMMNVGLDLGILENRFYVSFDYYTRKNTNLLLNIPVPSATGFTTALTNIGE 777

Query: 866  LVQNTGWEYTIGVKLLAAKAFKWNVNANLTVPTNKLLSLPSLDKVNRVAGFGYHIGLPLG 925
             V N GWE  +  + +  + F+W  N NL+   N++  L   +       F  +  + + 
Sbjct: 778  -VMNKGWELELTSRNITGQ-FEWTTNVNLSHNNNEVRQLGPNNTPILGGSFDINHRITMV 835

Query: 926  TTTMNTYMGVNPLTGLEVLEDIN-----------GNP-VATAGSTANMKTTLRNLYTSP- 972
               MNT   V  + G+   E+I+           G+P    A +   +    R L  +P 
Sbjct: 836  GQPMNTLFLVQNI-GILTQEEIDNGAALYGNQEEGDPQYLDANNDGVIDPDDRILSGNPN 894

Query: 973  --FYAGLQSSFEYKGLSMNL--SFDFNKQLKPRYFFVSSRPGRDAYNQPEIAYSLNRW-- 1026
              +  G+ ++F YKG  +N+     +   +   +     RPG   Y +  +    NRW  
Sbjct: 895  PDYIWGITNNFRYKGFDLNILVQGQWGGLIYSTFGRAMDRPGM-GYVENTLGRHRNRWRS 953

Query: 1027 -ENPGDIAVIQKYSTLLGSGLLTQTEAFYEDATYLRLTNIAISWNLPKSWTGIIGMKSSR 1085
             ENPGD    +  S+    G +  T+  Y  + Y R+ NI + ++L +       +  +R
Sbjct: 954  PENPGDGETGKAVSSF---GRIKNTDWLY-PSDYWRIRNITLGYDLGRLIANEKLLSGAR 1009

Query: 1086 IGINAQNLFTLSKYSG---PDPITGPS---GVMPPMRVIVLNVRASF 1126
            + + A+N F   KY+G   P+ +       G  P  + IV  V   F
Sbjct: 1010 VYMTAENFFGGDKYTGGFNPEAVNSDGDDYGAFPLSKSIVFGVNLKF 1056