Pairwise Alignments

Query, 1126 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

Subject, 1057 a.a., TonB-linked outer membrane protein, SusC/RagA family from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  338 bits (866), Expect = 2e-96
 Identities = 298/1066 (27%), Positives = 493/1066 (46%), Gaps = 94/1066 (8%)

Query: 122  YELNDQIVVSGKVVDE-NGSPLSGASVVLKANGKGTSTTVDGTFTMSGVDDGAILVIKYI 180
            ++L  Q  V G+V D   G PL GA++V K    GT +   G F++S V   A L+  YI
Sbjct: 25   HQLAAQPTVRGRVTDAIEGEPLIGATIVQKGTTNGTVSDDSGEFSIS-VPANATLIFSYI 83

Query: 181  GFDPKEVKAARELGT-IKLNLATSELDAVQIQAYTTTSKRLSLSNSV-SVRAKEIEDQIV 238
            G+  KEV+   +    + L      L+ V +  Y T  K+  L+ +V ++  KE+     
Sbjct: 84   GYLSKEVQIGNQTTVDVALEEDLKSLEGVVVVGYGT-QKKSDLTGAVGTISGKELLSIPS 142

Query: 239  SNPLLALQGKVAGIQIQQVSGNAGATINVKIQGVSSFRGNSSPFFVVDGVPYSSTTMVGT 298
             +    +QGK+AG QI Q +G  G  +N+ I+GVSS  G + P +V+DG    +    G+
Sbjct: 143  PSFDQMMQGKIAGTQITQTTGAPGGNVNIVIRGVSSITGGNQPLYVIDGFAMGAG---GS 199

Query: 299  GN-INLWGEATPTALGVAGNNAGISYGSGNPLSFLNPDDIESIDVLKDADATAIYGSRAA 357
            G+ ++ +   + ++ G+A N A       NPL+ +NP DIESI++LKDA ATAIYGSR A
Sbjct: 200  GSDVSSFNGNSFSSGGMAQNTAS----KINPLTNINPADIESIEILKDASATAIYGSRGA 255

Query: 358  NGAIVITTKRGKPGTLQIDFSSRNGWNQATFGADFLNTEQYLGIRNEAYRNSNAVISATN 417
            NG ++ITTKRGK G  +I+F + NG        D LN  Q+     +   N+  +     
Sbjct: 256  NGVVIITTKRGKQGQSKINFDASNGVQMIANKLDMLNARQFAEFVADGRDNAWVLSGGNA 315

Query: 418  YDLN-----GIWDKEKF---------TDWQKELIKTTGYDDASLSVSGGTLNSSYRLN-L 462
             D N     G   K +F         T+WQ  + + +      LS SGG     Y ++  
Sbjct: 316  SDPNEVRSAGTRVKPEFRNPEAITVNTNWQDVIFRPSVVQSYQLSASGGKEGVDYYVSGG 375

Query: 463  TGNRQNSAYARNFRNDNIALSISLNTASANQKFKLGIV-------GNYLNGFNNLPSLNQ 515
              N++      +F+  N+  +I    A   ++ KLGI        G +     +L     
Sbjct: 376  YFNQEGIIKGSDFKKFNLRSNID---AYLTKRLKLGISIAGSHSWGKFARAEGHLGQRGL 432

Query: 516  TTAGSFLYLLPPNAPNLYNTDGTLNWD-MDPTGTISRFRNPLSTYLTNPF---EVKTNNF 571
             +A     L    A ++Y+ +G    + +DP G      NPL   + + F      TN F
Sbjct: 433  ISAA----LASSPALSVYDKNGNYTSELLDPLGV--PVENPL--LIIDEFSDTRSSTNVF 484

Query: 572  TSNITASYNIVNGLDFKTSFGYNRLDQQEFTSNLAESVAPTARNTFIRSGSYRFTNTNNY 631
            T+N    Y IV GL  K+S G N +         +E     A+ +   +G ++ TN  N+
Sbjct: 485  TNNY-LEYEIVEGLTLKSSIGINYIADHTRLWKSSEIGEWGAKTSLATAGVHQRTNL-NW 542

Query: 632  IIEPQILYNHQFSG-HKLNFLLGATYNKSQGETSGITGSGQSSDSQVKNLSASSSFNQTG 690
            + E  + Y    +G H ++ ++G T  K   +T  +        +      A  + N   
Sbjct: 543  LNENVLNYRRSINGVHDVDAIVGFTAQKD--KTDWLQAGATDFPTDHIEYLAGGNVNAGT 600

Query: 691  SSFYEYRYNAGFFRLDYNFKERYLLGLSARRDGSTRFGPDNRFANFWSAAVGWIVSEETL 750
            +   E+   +   R++Y +K +YL+  + RRDGS+RFGP+NR+  F S +VG+ +SEE  
Sbjct: 601  NYVSEWSMLSLLARVNYTYKGKYLVTGTVRRDGSSRFGPNNRWGTFPSFSVGYRISEEPF 660

Query: 751  VKEKLPWLNFFKLRANYGLTGSDGVGDYTFMDLYSANTFYLPYQNVVGFAPGRLLNSKLQ 810
            + + + +++  K+RA+YG++G++ +G+Y  + L     +    Q  +G  P  L N  L 
Sbjct: 661  M-QSVTFIDNLKIRASYGVSGNNLIGNYAHIGLLGTTRYVSSNQAALGIIPQSLANENLT 719

Query: 811  WEEKRSLNIGFDANLLNNRVTLGINYNRNRSSNLLQSLNLPVTAGFASVDVNFDALVQNT 870
            WE     NIG D  L +NR+TL ++  +N   +LL + +LP  +GF++   N   L +N 
Sbjct: 720  WERSLQTNIGLDVALFDNRLTLSVDAYKNHKKDLLLNASLPAISGFSASTQNIGEL-ENK 778

Query: 871  GWEYTIGVKLLAAKAFKWNVNANLTVPTNKLLSLPSLD-KVNRVAGFGYHIGLPLGTTTM 929
            G E+T+   ++    F WN N N+ V  NK+L L S + ++   A     +G P+ +  M
Sbjct: 779  GLEFTLDAVVVNTGNFSWNSNFNIGVNKNKVLVLNSDNARIENSAYQFTEVGRPISSFYM 838

Query: 930  NTYMGV---------NPLTGLEV------LEDINGNPVATAGSTANMKTTLRNLYTSPFY 974
               +GV         +P    +V       ED+NG+ V T     N   T        + 
Sbjct: 839  LHAIGVFQDWDDVDAHPKQHPDVQPGDLKFEDVNGDGVIT-----NDDKTFVGDPWPDYT 893

Query: 975  AGLQSSFEYKGLSMNLSFDFNKQLKPRYFFVSSRPGRDAYNQPEIAYSLNRW---ENPGD 1031
             G  +  EY   ++++S     Q    YF         A  Q ++A +  RW   ++PG+
Sbjct: 894  FGFNNRLEYDNFALSISVT-GSQGNDVYFQGGEIILNAAGVQNQLAVTDERWKSLDDPGN 952

Query: 1032 IAVIQKYSTLLGSGLLTQTEAFYEDATYLRLTNIAISWNLPKSWTGIIGMKSSRIGINAQ 1091
                +   +    G+ + +   + D +Y+R+ NI +S+   +     I +    +  +  
Sbjct: 953  GFTPRAIRSDYAKGISSNSRYLF-DGSYVRIKNINLSYTFQRQTLEKINLSGLSVYGDIS 1011

Query: 1092 NLFTLSKYSGPDPITGPSG-----------VMPPMRVIVLNVRASF 1126
            N++T + Y G DP    +G             P  R+  L +R SF
Sbjct: 1012 NVYTFTDYPGYDPEASSTGDNIAASGIDYFSYPIPRIFTLGLRVSF 1057