Pairwise Alignments

Query, 1076 a.a., error-prone DNA polymerase from Pedobacter sp. GW460-11-11-14-LB5

Subject, 1091 a.a., DNA polymerase III subunit alpha from Agrobacterium fabrum C58

 Score =  989 bits (2558), Expect = 0.0
 Identities = 542/1080 (50%), Positives = 714/1080 (66%), Gaps = 37/1080 (3%)

Query: 3    YSELQVTSNFSFLRGASHAHELVEQAEAFDYQKIAITDRNTLAGIVRAHAACREKNVKLI 62
            Y+ELQVT++FSFLRGAS   EL EQA+    + + + DRN+LA I RA+ A     V+L+
Sbjct: 6    YAELQVTTHFSFLRGASSCDELFEQAKNLGIEALGVVDRNSLAAIPRAYEAANNHGVRLV 65

Query: 63   PACRLDMLDGPSLLAYPTDKDAYGRLSALLTLGNMRAEKGSCHISRADVYAHSKGIIFCL 122
              CRLD+ D  S+L YP D+ AYGRL  LL++G  R  KG C +S  D+ A+ +G+I  +
Sbjct: 66   IGCRLDLDDDLSVLVYPMDRAAYGRLCRLLSVGKKRGGKGKCRLSWDDLVAYGEGLI--V 123

Query: 123  VMPGELNRRFEYEASFISAVA--EYKQALNGQLYLAATRSYMGNDDKLIFRTSQLSDFYG 180
            V+  +L       A  + A+     K A   + Y+A +     ND   +F  S ++   G
Sbjct: 124  VLLADL-------ADDLCALRLRRLKAAFADRAYMALSLRRRPNDQMRLFELSGMAQAAG 176

Query: 181  IPVVATGDIHYHNPSRRELQDVLTCVREKCTIQEAGFRLHQNAERYMKEVAEMERLFRKY 240
            +P V T D+ +H P RR LQDV+TC+R  CTI EAGFR  ++A+RYMK   EM RLF +Y
Sbjct: 177  VPTVVTNDVLFHVPERRMLQDVVTCIRHNCTIDEAGFRRERHADRYMKPPEEMHRLFARY 236

Query: 241  PSAIKNTMVIAEACNFSLDELKYVYPEEINQSGKSPMEELEFLTWKGAHEFYGEEIPEKV 300
            P A+  ++ IA+ C FSL EL Y YPEE +  G +  + LE + W+     Y   +PEKV
Sbjct: 237  PEALSRSLEIAKRCKFSLKELVYQYPEERSLPGLTAQQALEKMVWEAVPGRYPNGLPEKV 296

Query: 301  VKMIHHEMEFVRHMDYANYFLFVEDIVREARSRGILCQGRGSAANSAICFVLGITSVNPM 360
             K +HHE++ V  + YA+YFL V  IVR ARS+ ILCQGRGSAANS ICFVLGIT+++P 
Sbjct: 297  EKALHHELDVVGRLQYASYFLTVNAIVRYARSKDILCQGRGSAANSVICFVLGITAIDPA 356

Query: 361  KF-DLLFERFISPARNEPPDIDVDFEHERREEIIQYIYNKYGRDRAAIVATVTQQHQKGA 419
             F +L+FERF+S  R EPPDIDVDFEH+RREE+IQ++Y+ YGRD+AA+ + VT+   +GA
Sbjct: 357  LFSNLVFERFVSENRGEPPDIDVDFEHQRREEVIQWVYDTYGRDKAALCSVVTRYRGRGA 416

Query: 420  IRDVGKAMGLSVDTINRLSSSIWEFTDEWFEG---KRVTEQGLNPNDPHLKKTLELTSQM 476
            +RDVGK +GL  D    LSS +W     W EG   K+V E  LN  D  LK   EL +Q+
Sbjct: 417  LRDVGKVLGLPEDLTKLLSSQVWR----WSEGVGEKQVKELNLNMEDRRLKLAFELANQL 472

Query: 477  MGFPRQLGQHTGGFVVTQGKLTDLCPILNARMEDRTNIEWNKDDIDALGFLKVDVLALGM 536
            +G PR   QH GGFV++  +L +L PI  A M DR  IEW+KDDID + F+K+D LALGM
Sbjct: 473  VGTPRHHSQHPGGFVLSHDRLDELVPIEPAAMNDRQIIEWDKDDIDIVKFMKMDCLALGM 532

Query: 537  LTCIRKAFDLCRDYYGKHFTLANIPQDDPEVYDMICLADTLGVFQIESRAQMSMLPRLKP 596
            L+C+++ FDL     G+ + LA +P DDP  + MI  ADTLG FQIESRAQMSMLPRLKP
Sbjct: 533  LSCMKRGFDLLEARTGEKYDLAAMPPDDPATFAMIQKADTLGTFQIESRAQMSMLPRLKP 592

Query: 597  REFYDLVIEVAIVRPGPIQGDMVHPYLRRRNGEEPVVYPSPELEEILGRTLGVPLFQEQA 656
             +FYDLVI+VAIVRPGPIQGDMVHPYLRRR G+EPV+Y  P+LE IL +TLGVPLFQEQA
Sbjct: 593  AKFYDLVIQVAIVRPGPIQGDMVHPYLRRRQGKEPVLYEKPQLENILKKTLGVPLFQEQA 652

Query: 657  MKIAIVAAGFTPAEADGLRRSMATFKFKGLVNQYEQKLIEGMLAKGYTLEFAKRIFKQLE 716
            M+IA+  A FT  EAD LRR+MATFK  G ++++++KL+ GM+A GY  EFA+RIFKQLE
Sbjct: 653  MRIAMDCADFTADEADQLRRAMATFKNVGTISKFKEKLVTGMVANGYDKEFAERIFKQLE 712

Query: 717  GFGSYGFPESHAASFALLVYVSCWLKHYYPDVFAAALLNSMPMGFYQPAQIVIDAQKHTV 776
            GFGSYGFPESHAASFAL+ Y S WLK ++PD+F  A+LNS PMGFY PAQIV DA+ H V
Sbjct: 713  GFGSYGFPESHAASFALIAYASSWLKCHHPDIFCTAILNSQPMGFYAPAQIVRDARDHGV 772

Query: 777  EVREVDVNHSLWDNKLE------EKSGKYFAMRLGFRQISGIRADDVDTLVNGRGE-GYK 829
            EVR V VN+S +D  LE      +K  + FA+RLG R + G+  D    +V  R +  + 
Sbjct: 773  EVRPVCVNNSRFDCTLEPTGKKNDKGEERFAVRLGLRMVKGLSNDHAADIVAARQDRPFA 832

Query: 830  SITAL-RDVGVSIAALERLADADAF-RSMGMDRRKALWEVSALQDMPVELFKGQA----- 882
            S+  L R  GV  AAL  LA+ADAF  S+ + RR+ALW + AL+D P+ LF   A     
Sbjct: 833  SVDDLWRRAGVPAAALVCLAEADAFLPSLRLARREALWAIKALRDEPLPLFAAAAIRENA 892

Query: 883  -SESVLETQVELPLMGKGEHVVQDYATVGLSLKAHPGSFVRPQLDMLNIRSCHHINNDST 941
              E + E  V L  M  G  VVQDY  VGL+L+ HP +F+R  L    I +C        
Sbjct: 893  VIEELQEPSVALRPMTDGGEVVQDYGHVGLTLREHPMTFLRRDLSRRRIVTCAEAVR-VR 951

Query: 942  NGQLVKVAGLVLVRQRPGTAGGVCFITIEDETGYSNLVVFEKLFDTYRKEILHARLLMVE 1001
            +G  ++ AGLVLVRQRPG+A GV F+T+EDETG +N V++ K F+ YR+ +L A ++ + 
Sbjct: 952  DGTWLETAGLVLVRQRPGSAKGVIFMTLEDETGIANAVLWVKTFEKYRRVVLSAGMVGIY 1011

Query: 1002 GRLQREGKVVHVIVSKCFDFTKMLGKLVQREVDELPVLTMARGDEKTAPYPSQNKRTQVR 1061
            G++QREG+VVH++  +  D +  L  + +R  +  P L   RGDE     P  ++  + R
Sbjct: 1012 GKIQREGEVVHLVAHRLTDLSHALASVGERN-NAFP-LPHGRGDEFHHGMPDDHRAIRKR 1069