Pairwise Alignments

Query, 382 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

Subject, 380 a.a., DNA polymerase III, gamma/tau subunits from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  253 bits (646), Expect = 6e-72
 Identities = 138/377 (36%), Positives = 210/377 (55%), Gaps = 6/377 (1%)

Query: 1   MQFKAIIGQERVKQQLVQTVKENRISHAQLFLSPAGSGAVPLAIAYAQFINCLNKGENDS 60
           M F +I G    KQ+L+Q +  N ++HA LF  P G+  + +A+A A ++NC +KG  D+
Sbjct: 1   MLFSSIPGLHETKQRLIQAINNNHLAHALLFHGPEGAANLKMALALATYVNCEDKGAEDA 60

Query: 61  CGECSSCRKYERLIHPDLHFSYPFFASA-----SVKTAIDVLEEWRAMLMQDPYFDMDIW 115
           CG CSSC+K  +L+HPDL F++P   S           +D+L  WR  ++   Y ++  W
Sbjct: 61  CGVCSSCQKMAKLVHPDLSFTFPVPGSLIKEDDDKNKKVDILGPWREFVLTRSYGNLQDW 120

Query: 116 RSKLDAANKQANINIAECHDIIKKLSYKAFEAETKVLIMWLPEYLDKAG-NALLKLIEEP 174
                   KQ NI+ A    II+ +S K+FE   K +++W+PEY+  A  NALLK++EEP
Sbjct: 121 IYHNGFEKKQLNISKAAAKQIIQTVSLKSFEGGYKTILVWMPEYMHTAAANALLKVLEEP 180

Query: 175 PANTLFILIAQSQDQILTTILSRTQIVKIPKLSSEEVTGYLLNASGLTEHQAIDYSFLAD 234
           PA TLF+++A   +Q+LTTILSRTQ V +   S EE+  +L++    +   A+  + LA+
Sbjct: 181 PAKTLFLMVAHQPEQLLTTILSRTQKVLVRAFSDEEIKEHLISEGLCSREGALQVAPLAN 240

Query: 235 GNLIEAKALAADTQSDSSGTFTAWLRMGFGNKVPDLIEFTDEAAKWGRENQKNFLKYGVN 294
           G++ EA  L      +++  F  W+R+ F   +  ++   +      +E QK     G+N
Sbjct: 241 GSMREAYRLVDQVIDENTAKFRDWMRICFTLDINSIMSLAEGFQGADKEGQKALFLTGLN 300

Query: 295 YLRECCLILSGAEELVKLPPLTFETAKKLSTHVLTLPMAEAIIGELEKAHYHIERNANPK 354
            LRE  L  S  EEL++  P   E  +  S   LT      I   L  AHYH+ERNAN K
Sbjct: 301 ILRESLLKRSQLEELMRTAPADREFVENFSLKALTEEKILQIYRLLNAAHYHLERNANAK 360

Query: 355 ILFLDVSLQLVKIIKFK 371
           ILF D+S  + K+++ K
Sbjct: 361 ILFADLSFDMAKVLRKK 377