Pairwise Alignments

Query, 382 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

Subject, 573 a.a., DNA polymerase III, subunit gamma and tau from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 79.7 bits (195), Expect = 2e-19
 Identities = 69/267 (25%), Positives = 116/267 (43%), Gaps = 49/267 (18%)

Query: 3   FKAIIGQERVKQQLVQTVKENRISHAQLFLSPAGSGAVPLAIAYAQFINCLNKGEN-DSC 61
           FK+++GQ+ +   L   +K N ++ A LF  P G G    A   A+ INC N  ++ ++C
Sbjct: 16  FKSVVGQQHITTTLKNAIKNNHLAQAFLFCGPRGVGKTTCARILAKTINCENLSDDFEAC 75

Query: 62  GECSSCRKYERLIHPDLHFSYPFFASASVKTAIDVLEEWRAMLMQDPYFDMDIWRSKLDA 121
            EC SC+ +      ++H                                      +LDA
Sbjct: 76  NECESCKAFNTNSSFNVH--------------------------------------ELDA 97

Query: 122 ANKQANINIAECHDIIKKLSYKAFEAETKVLIMWLPEYLD-KAGNALLKLIEEPPANTLF 180
           A   +N ++ +  +++ ++ Y   +   K+ I+     L  +A NA LK +EEPP   +F
Sbjct: 98  A---SNNSVDDIRNLVDQVRYAPQKGSYKIYIIDEVHMLSTQAFNAFLKTLEEPPKYAIF 154

Query: 181 ILIAQSQDQILTTILSRTQIVKIPKLSSEEVTGYLLNASGLTEHQAIDYSFLADGNLIEA 240
           IL    + +I+ TILSR QI    ++  +++  +L     +   + I Y   A   LI A
Sbjct: 155 ILATTEKHKIIPTILSRCQIFDFNRIQIKDIAEHL---KYIASEEDISYEDEA-LRLIAA 210

Query: 241 KALAADTQSDSSGTFTAWLRMGFGNKV 267
           KA  A    D+   F   +    GNK+
Sbjct: 211 KADGA--LRDALSIFDLIVTYSAGNKL 235