Pairwise Alignments

Query, 352 a.a., 23S rRNA (adenine(2503)-C(2))-methyltransferase from Pedobacter sp. GW460-11-11-14-LB5

Subject, 390 a.a., hypothetical protein from Agrobacterium fabrum C58

 Score =  216 bits (549), Expect = 1e-60
 Identities = 126/346 (36%), Positives = 190/346 (54%), Gaps = 20/346 (5%)

Query: 22  VAMQQPAFRAKQIYQWLWEKSATSFEQMSNLSKDLRKALDETFAINAVQVNNSQFSNDHT 81
           V  +Q   R  Q++ WL+ +  + F+ M+N++K+LR+ L   F I   ++   Q SND T
Sbjct: 24  VPQKQVKMRVSQLWNWLYVRGVSDFDNMTNVAKELREKLKAAFTIARPEIVEEQISNDGT 83

Query: 82  IKNTFRLADGNI-----VEGVLIPLEDRMTACVSSQVGCSLTCKFCATGYMDRKRNLNAD 136
            K   R           +E V IP E R T C+SSQVGCSLTC FC TG     RNL A+
Sbjct: 84  RKWLMRFPPRGAGRPVEIETVYIPEEGRGTLCISSQVGCSLTCSFCHTGTQRLVRNLTAE 143

Query: 137 EIYDQVVLIDKQAKQ-------------NYNNPLTNIVYMGMGEPLLNYANVLKSIERIT 183
           EI  Q++L   +                +    ++NIV MGMGEPL N+ +V  ++   T
Sbjct: 144 EILSQLLLARDRLGDFPDGSTPVGAYVPSEGRKVSNIVMMGMGEPLYNFEHVKTALLIAT 203

Query: 184 APDGLNMSYKRITVSTAGIAKMIKKLGDDGAKFNLALSLHAADDKKRNEIMPINEANSLK 243
             DGL++S +R+T+ST+G+   I + GD+     LA+SLHA  D  R+ ++PIN+   LK
Sbjct: 204 DGDGLSLSKRRVTLSTSGVVPEIFRTGDEIGVM-LAISLHAVRDDLRDMLVPINKKYPLK 262

Query: 244 ALADALKYY-FAKTKNPVTYEYIVFNHFNDEISDAMDLAKFCKHIPCKVNLIEYNPISFA 302
            L +A + Y        +T+EY++    ND + DA  L +  K +P K+NLI +NP    
Sbjct: 263 ELIEACRNYPGVSNARRITFEYVMLKDVNDSLEDAKMLVQLLKGVPAKINLIPFNPWPGT 322

Query: 303 DFTNAEGDKIDAFSNYLKSQGINTNIRRSRGKDIDAACGQLAVKEE 348
           ++  +E  +I+ F++++   G  + IR  RG+DI AACGQL  + E
Sbjct: 323 NYQCSEWAQIEKFADFINQAGYASPIRTPRGRDILAACGQLKSESE 368