Pairwise Alignments

Query, 739 a.a., peptidase from Pedobacter sp. GW460-11-11-14-LB5

Subject, 850 a.a., penicillin-binding protein 1a, murein transglycosylase and transpeptidase from Escherichia coli BL21

 Score =  225 bits (574), Expect = 6e-63
 Identities = 161/606 (26%), Positives = 281/606 (46%), Gaps = 86/606 (14%)

Query: 43  LPSFRDIEHPKSNQASEIIAEDGRPLGTYFVQNRSNVTYKEISENVINGLIATEDTRFKE 102
           LP    ++  +     +I + DG  +  Y  + R  VT  +I   ++   IATED+RF E
Sbjct: 33  LPDVATLKDVRLQIPMQIYSADGELIAQYGEKRRIPVTLDQIPPEMVKAFIATEDSRFYE 92

Query: 103 HSGIDFKRTFTIIGYNLIG--KKQGASTITQQLAKNLFPRESNLNFFSLVLTKFKEWIVA 160
           H G+D    F      L      QGASTITQQLA+N F     L+    ++ K KE  +A
Sbjct: 93  HHGVDPVGIFRAASVALFSGHASQGASTITQQLARNFF-----LSPERTLMRKIKEVFLA 147

Query: 161 VKLERNYTKEEIITMYLNTVDFGNQAYGIKSAARVYFNTTPDKLTLTQAATLVGMQKGIT 220
           +++E+  TK+EI+ +YLN +  G +AYG+ +AA+VYF  T D+LTL + A + G+ K  +
Sbjct: 148 IRIEQLLTKDEILELYLNKIYLGYRAYGVGAAAQVYFGKTVDQLTLNEMAVIAGLPKAPS 207

Query: 221 MYSPTRHPERSRDRRNTVMAMMVKSELLTQQEFDEQKEKPLNLHFNAATVNDGIAPYFRS 280
            ++P    +R+  RRN V++ M+    +TQQ+FD+ + + +N +++A  +    APY   
Sbjct: 208 TFNPLYSMDRAVARRNVVLSRMLDEGYITQQQFDQTRTEAINANYHAPEIAFS-APYLSE 266

Query: 281 VLKNDIKTIFQEQSITKPDGTPYDLDRDGLKIYTTLNYDMQVYAEEAQKEYM-------- 332
           +++ ++   + E +             DG +IYTT+   +Q  A++A +  +        
Sbjct: 267 MVRQEMYNRYGESAY-----------EDGYRIYTTITRKVQQAAQQAVRNNVLDYDMRHG 315

Query: 333 -----KILQAQFIASWKGR-----------------------NPFKDKALQIE------- 357
                 +L     ++W                          NP +  A+  +       
Sbjct: 316 YRGPANVLWKVGESAWDNNKITDTLKALPTYGPLLPAAVTSANPQQATAMLADGSTVALS 375

Query: 358 -QGIKRSDRYKSLKLEGKSDDEIKDDFNTKTEMTI-----FTWKGNIDTVMKPIDSVRYY 411
            +G++ +  Y+S   +G +  ++ D   T  ++ +       W   +  V          
Sbjct: 376 MEGVRWARPYRSDTQQGPTPRKVTDVLQTGQQIWVRQVGDAWWLAQVPEV---------- 425

Query: 412 KMLLRNAMMTMDPTNGHVKAWVGGINYEHFKYDQVKMGTRQVGSTAKPFTYAVAIENGYS 471
                +A+++++P NG V A VGG ++   K+++     RQVGS  KPF Y  A++ G +
Sbjct: 426 ----NSALVSINPQNGAVMALVGGFDFNQSKFNRATQALRQVGSNIKPFLYTAAMDKGLT 481

Query: 472 PCYTVPNVPVT--IDGYGEPWTPRNSGKPLPGNITLQKALAYSQNFVTAYLMKQVGPVAV 529
               + +VP++    G G  W P+NS     G I L++ L  S+N V    M+ +G    
Sbjct: 482 LASMLNDVPISRWDAGAGSDWQPKNSPPQYAGPIRLRQGLGQSKNVVMVRAMRAMGVDYA 541

Query: 530 STLATKMGIP--NVPAFPSICLGTFDSSIYNMVGAYGAFANKGTYTKPIYLLRIEDKNGV 587
           +    + G P  N+    S+ LG+   +   +   Y   AN G    P ++ +IE+  G 
Sbjct: 542 AEYLQRFGFPAQNIVHTESLALGSASFTPMQVARGYAVMANGGFLVDPWFISKIENDQGG 601

Query: 588 VLFSQK 593
           V+F  K
Sbjct: 602 VIFEAK 607



 Score = 43.1 bits (100), Expect = 6e-08
 Identities = 24/73 (32%), Positives = 36/73 (49%), Gaps = 13/73 (17%)

Query: 634 VGAKTGTTQNNSDGWFMAITPQLVTGIWTGCEDRAFHF------------ISTNQGEGAN 681
           +G KTGTT ++ D WF    P +VT +W G +D   +             IS  +G GA 
Sbjct: 713 IGGKTGTTNSSKDAWFSGYGPGVVTSVWIGFDDHRRNLGHTTASGAIKDQISGYEG-GAK 771

Query: 682 TALPIFAGFIKRV 694
           +A P +  ++K V
Sbjct: 772 SAQPAWDAYMKAV 784